DRSC/TRiP Functional Genomics Resources

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Protein Alignment dco and vrk1

DIOPT Version :9

Sequence 1:NP_001263132.1 Gene:dco / 43673 FlyBaseID:FBgn0002413 Length:440 Species:Drosophila melanogaster
Sequence 2:NP_998550.1 Gene:vrk1 / 406694 ZFINID:ZDB-GENE-040426-2709 Length:425 Species:Danio rerio


Alignment Length:381 Identity:103/381 - (27%)
Similarity:171/381 - (44%) Gaps:69/381 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KYRLGRKIGSGSFGDIYLGTTINTGEEVA-----IKLECIRTKHPQLHIESKFY----------- 56
            |::||..:|.|.||.:||....::|...|     ||:|  .:.:..|..|.|||           
Zfish    37 KWKLGSAVGQGGFGLLYLANEDSSGPVTADAPYVIKVE--PSDNGPLFSELKFYMRAAKPDLIGA 99

  Fly    57 ----KTMQGGIGIPRIIWCG---SEGD-YNVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQMI 113
                |.|: .:|:|:....|   ..|. |..|||:..|..|:.||....::||.|.||.|..:::
Zfish   100 WMKSKKME-YLGVPKYWGSGFHEKNGKRYRFMVMDRFGTDLQKLFEGNGKKFSRKLVLQLGLRLL 163

  Fly   114 SRIDYIHSRDFIHRDIKPDNFLMGLGKKGNLVYIIDFGLAKKFRDARSLKHIP--YRENKNL--T 174
            ..::|||..:::|.|||..|.|:.. ...|.|:::|:|||.::    :.:.:|  |:|:...  .
Zfish   164 DILEYIHDHEYVHADIKASNLLLSY-TNPNQVFLVDYGLAYRY----APEGVPKEYKEDPKRCHD 223

  Fly   175 GTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGALPWQGLKAANKRQK--YERISEKKLSTSI 237
            ||..:.||:.|.|:..|||.|||.:||.::.:....|||:     :|.|.  |.|.|:.:...:|
Zfish   224 GTIEFTSIDAHKGVSPSRRADLEIMGYCMIQWLCSRLPWE-----DKLQDPLYVRDSKLRCRDNI 283

  Fly   238 VVLCK------GFPSEFVNYLNFCRQMHFDQRPDYCHLRKLFRNLFHRLGFTYDYVFDW------ 290
            ....|      ..|:|...::...:.:.:..||||..||.:.:.....:|.|.|...|:      
Zfish   284 DEFLKSCFASGNIPAEMGKFMQEVKVLGYTDRPDYDKLRGILQQGLKSIGSTDDKKLDFGVATNS 348

  Fly   291 -NLLKFGGPRNPQAIQQAQDGADGQAGHDAVAAAAAVAAAAAASSHQQQQHKVNAA 345
             :|.....|:..:|.::.|             :|....:..|......|:.:||.|
Zfish   349 TSLPSVKTPKRKKAEEKGQ-------------SADETDSTPAKKRRAPQKKEVNGA 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dcoNP_001263132.1 STKc_CK1_delta_epsilon 8..282 CDD:271027 89/309 (29%)
vrk1NP_998550.1 PKc_like 27..327 CDD:304357 89/302 (29%)
SPS1 37..>265 CDD:223589 74/240 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 343..425 10/62 (16%)
GAGA_bind <373..>424 CDD:283799 5/19 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1164
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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