DRSC/TRiP Functional Genomics Resources

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Protein Alignment tll and unc-55

DIOPT Version :10

Sequence 1:NP_524596.1 Gene:tll / 43656 FlyBaseID:FBgn0003720 Length:452 Species:Drosophila melanogaster
Sequence 2:NP_001122482.2 Gene:unc-55 / 192082 WormBaseID:WBGene00006790 Length:370 Species:Caenorhabditis elegans


Alignment Length:453 Identity:125/453 - (27%)
Similarity:179/453 - (39%) Gaps:143/453 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 SPAASSRILYHVPCKVCRDHSSGKHYGIYACDGCAGFFKRSIRRSRQYVCKSQKQGLCVVDKTHR 85
            ||.|:.       |.||.|.|||||||.::|:||..|||||||||..|.|::.|.  |.:|..||
 Worm    15 SPDATD-------CVVCGDKSSGKHYGQFSCEGCKSFFKRSIRRSLSYTCRATKN--CAIDVQHR 70

  Fly    86 NQCRACRLRKCFEVGMNKDAVQHERGPR-NSTLRRHMAMYKDAMMGAGEMPQIPAEILMNTAALT 149
            |||:.|||.||..:||.|:      |.| |.|.....|:.:..:                     
 Worm    71 NQCQYCRLTKCIRMGMRKE------GRRSNETQTAVSAVQRGRL--------------------- 108

  Fly   150 GFPGVPMPMPGLPQRAGHHPAHMAAFQPPPSAAAVLDLSVPRVPHHPVHQGHHGFFSP--TAAYM 212
                 |:.||.|      .|.:|....|.|.      :|||              |:|  ||.: 
 Worm   109 -----PVTMPSL------FPPNMFLRSPFPF------MSVP--------------FNPLMTAQF- 141

  Fly   213 NALATRALPPTPPLMAAEHIKETAAEHLFKNVNWIKSVRAFTELPMPDQLLLLEESWKEFFILAM 277
                      |.|.: .|.|.|.||:.:|..|||.::  :.:.|...|||:||..||...||.|:
 Worm   142 ----------TKPSI-KESIFEFAAQTIFATVNWART--SMSNLVKGDQLILLRHSWTPIFIFAL 193

  Fly   278 AQYLMPMNFAQLLFVY----------------------ESENANREIMGMVTRE--VHAFQEVLN 318
            ||    .|||..|..:                      |.|..:.|....|..|  ...||..::
 Worm   194 AQ----SNFALNLSTHLTAVTATAASTENGSSSLGSKSEDEEKSEEKPERVFDEPQFQGFQAKID 254

  Fly   319 QLCHLNIDSTEYECLRAISLFRKSPPSASSTEDLANSSILTGSGSPNSSASAESRGLLESGKVAA 383
            ::...::|..|...|||:.||                             |.:...|.|.||:..
 Worm   255 KIRDFHLDVVESSSLRAVLLF-----------------------------SCDEEALEEKGKIEE 290

  Fly   384 MHNDARSALHNYIQRTHPSQPMRFQTLLGVVQLMHKVSSFTIEELFFRKTIGDITIVRLISDM 446
            :....:||:..|.:....|:  |:..:...:||:....:..|..|||.:.:|...:..::||:
 Worm   291 IVEKLKSAVDEYCKMNKRSE--RYHQICECLQLLKSTRNLPISRLFFSRLLGTTPLETILSDL 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tllNP_524596.1 NR_DBD_TLX 25..117 CDD:143537 44/92 (48%)
NR_LBD 215..436 CDD:472173 58/244 (24%)
unc-55NP_001122482.2 NR_DBD_COUP_TF 21..89 CDD:143516 40/69 (58%)
NR_LBD_F2 148..325 CDD:132728 52/213 (24%)

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