DRSC/TRiP Functional Genomics Resources

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Protein Alignment tll and nhr-67

DIOPT Version :10

Sequence 1:NP_524596.1 Gene:tll / 43656 FlyBaseID:FBgn0003720 Length:452 Species:Drosophila melanogaster
Sequence 2:NP_502094.1 Gene:nhr-67 / 178024 WormBaseID:WBGene00003657 Length:416 Species:Caenorhabditis elegans


Alignment Length:436 Identity:127/436 - (29%)
Similarity:183/436 - (41%) Gaps:156/436 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 SSRILYHVPCKVCRDHSSGKHYGIYACDGCAGFFKRSIRRSRQYVCK---SQKQGLCVVDKTHRN 86
            |||||..|.|:||.||||||||.|::||||||||||||||.||||||   |..:|.|.|||||||
 Worm    12 SSRILLDVDCRVCEDHSSGKHYSIFSCDGCAGFFKRSIRRHRQYVCKNKGSPSEGQCKVDKTHRN 76

  Fly    87 QCRACRLRKCFEVGMNKDAVQHERGPRNSTLRRHMAMYKDAMMGAGEMPQIPAEILMNTAALTGF 151
            ||||||||||.|:||||||||||||||||:|||...|:                           
 Worm    77 QCRACRLRKCLEIGMNKDAVQHERGPRNSSLRRQQMMF--------------------------- 114

  Fly   152 PGVPMPMPGLPQRAGHHPAHMAAFQPPPSAAAVLDLSVPRVPHHPVHQGHHGFFSPTAAYMNALA 216
                                                             .|| .||.:..|.:.:
 Worm   115 -------------------------------------------------DHG-SSPNSPEMGSES 129

  Fly   217 TRALPPTPPLMAAEHIKETAAEHLFKNVNWIKSVRAFTELPMPDQLLLLEESWKEFFILAMAQYL 281
            ...:.||.. |..:.:..|||...|..|.:.::  ....:|...|:.:.:::|            
 Worm   130 DAIILPTSS-MNRDTVAGTAARIFFALVGFCQN--PLNGVPKERQMTMFQQNW------------ 179

  Fly   282 MPMNFAQLLFVYESENANREIMGMVTREVHAFQEVLNQLCH-------LNIDSTEYECLRAISLF 339
                 |.||.::.:|........:.|..:....|..|.:.:       |.:|:.||..|:..:::
 Worm   180 -----AALLVLHATETRAITSKQIRTETISGSSEQRNAVANAFEIIERLQLDNREYMMLKHFTMW 239

  Fly   340 RKSPPSASSTEDLANSSILTGSGSPNSSASAESRGLLESGKVAAMHNDARSALHNYIQRTHPSQP 404
            |.:|.:......||                                     ::.|:   ||.::|
 Worm   240 RDTPSAIQIVFQLA-------------------------------------SIQNF---THRTEP 264

  Fly   405 MRFQTLLGVVQLMHKVSSF---TIEELFFRKTIGDITIVRLISDMY 447
            .|:      :|.::.:::.   :|.::.||.:||..::.|||.||:
 Worm   265 TRY------IQCINAIAAIPTTSIIDVLFRPSIGSASMPRLIQDMF 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tllNP_524596.1 NR_DBD_TLX 25..117 CDD:143537 75/94 (80%)
NR_LBD 215..436 CDD:472173 37/230 (16%)
nhr-67NP_502094.1 NR_DBD_like 13..107 CDD:413390 74/93 (80%)

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