DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wts and Lats2

DIOPT Version :10

Sequence 1:NP_733403.1 Gene:wts / 43651 FlyBaseID:FBgn0011739 Length:1105 Species:Drosophila melanogaster
Sequence 2:NP_001100737.1 Gene:Lats2 / 305922 RGDID:1305906 Length:1042 Species:Rattus norvegicus


Alignment Length:1110 Identity:451/1110 - (40%)
Similarity:555/1110 - (50%) Gaps:286/1110 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 QPGAGSISVSGVGVGVVGVANGRVPKMM---------TALMPNKLIRKPSIERDTASSHYLRCSP 147
            |.|:.||..:...:..:|..:.|..:::         ..|:|..:.|:||.|             
  Rat   123 QTGSRSIEAALEYISKMGYLDPRNEQIVRVIKQTSPGKGLVPTAVTRRPSFE------------- 174

  Fly   148 ALDSGAGSSRSDSPHSHHTHQPSSRTVG--NPGGNGGFSPSP--------SGFSEVAPPA---PP 199
                |.|.:           .||...:|  |..|.......|        .|.|....||   ||
  Rat   175 ----GTGEA-----------FPSHHQLGGANYEGPAALEEMPRQYLDFLFPGASVHGAPAHQHPP 224

  Fly   200 PRNPTACSAATPPP-------PVPPTSQAYVKRRSPALNNRPPAIAPPTQRGNSPVITQNGLKNP 257
            ....||..|.|..|       .:......|..:|||:..::.|   |.|.  :|....|.|   |
  Rat   225 KGYSTAVDAGTHFPGAHYGRAHLLSEQPGYGVQRSPSFQSKTP---PDTY--SSLAKAQGG---P 281

  Fly   258 QQQLTQQLKSLNLYPGGGS---------GAVVEPPPPYLIQGGAGGAAPPPPPPSYTASMQSRQS 313
            ...||        :|....         .|.|....|..:.|..|        |::|.     .|
  Rat   282 PASLT--------FPAHAGLYTTSHHKPAAAVPGAHPLHVLGTRG--------PTFTG-----DS 325

  Fly   314 PTQSQQSDYRKSPSSGIYSATSAGSPSPITVSLPPAPLAKPQPRVYQARSQQPIIMQSVKSTQVQ 378
            .||:..:..|.|.::.:|   ..|||.|    .|.||||:          :..:..||::::   
  Rat   326 STQAVLAPSRNSLNNDLY---ELGSPVP----WPAAPLAR----------RDSLQKQSLEAS--- 370

  Fly   379 KPVL---------QTAVAPQSPSSASASNSPVHVLAAPPSYPQKSAAVVQQQQQAAAAAHQQQHQ 434
            :|.:         .:..:||...|..|.|:...|.||...:|.||..|::.:.|.|..       
  Rat   371 RPHVAFRAGPSRTNSFSSPQPEPSLPAPNTVTAVTAAHILHPVKSVRVLRPEPQTAVG------- 428

  Fly   435 HQQSKP---PTPTTPPLV-GLNSKPNCLEPPSYAKSMQAKAATVVQQQQQQQQQQQQVQQQQVQQ 495
              .|.|   |.||.|... ||.||.....||..                                
  Rat   429 --PSHPAWVPAPTAPAAAEGLESKEGSAGPPPL-------------------------------- 459

  Fly   496 QQQQQQQQLQALRVLQAQAQRERDQRERDQRERERDQQKLANGNPGRQMLPPPPYQSNNNNNSEI 560
                                      :.|....||             ..|||||..:       
  Rat   460 --------------------------DMDFGGSER-------------RCPPPPYPKH------- 478

  Fly   561 KPPSCNNNNIQISNSNLATTPPIPPAKYNNNSSN-----TGANSS--GGS------NGSTGTTAS 612
                                 .:.|:|....|:.     ||...|  ||:      .|..|....
  Rat   479 ---------------------LLLPSKSEQYSAGLDRLCTGVEQSLRGGTEQDRNDKGHKGAKGD 522

  Fly   613 SSTSCKKIKHASPIPERKKISKEKEEERKEFRIRQYSPQAFKFFMEQHIENVIKSYRQRTYRKNQ 677
            .:...||....||:|.||   ..::||::|.||:.|||.|||||||||:|||||:|:|:..|:.|
  Rat   523 KAGRDKKQIQTSPVPVRK---NSRDEEKRESRIKSYSPYAFKFFMEQHVENVIKTYQQKVSRRLQ 584

  Fly   678 LEKEMHKVGLPDQTQIEMRKMLNQKESNYIRLKRAKMDKSMFVKLKPIGVGAFGEVTLVSKIDTS 742
            ||:||.|.||.:..|.:|||:|.||||||.||||||||||||||:|.:|:||||||.|..|:|| 
  Rat   585 LEQEMAKAGLCETEQEQMRKILYQKESNYNRLKRAKMDKSMFVKIKTLGIGAFGEVCLACKVDT- 648

  Fly   743 NHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNNWVVKLYYSFQDKDNLYFVMDYIPGGDLMS 807
            :.|||||||||.|||.|||||||||||||||||||.|||||||||||||:||||||||||||:||
  Rat   649 HALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDSLYFVMDYIPGGDMMS 713

  Fly   808 LLIKLGIFEEELARFYIAEVTCAVDSVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 872
            |||::.:|.|.||||||||:|.|::||||||||||||||||||||.|||||||||||||||||||
  Rat   714 LLIRMEVFPEHLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTH 778

  Fly   873 NSKYYQENGNHSRQDSMEP---WEEYS--ENGPKPTVLERRRMRDHQRVLAHSLVGTPNYIAPEV 932
            ||||||: |||.|||||||   |::.|  ..|.:...||:|..:.|||.||||||||||||||||
  Rat   779 NSKYYQK-GNHIRQDSMEPGDLWDDVSNCRCGDRLKTLEQRAQKQHQRCLAHSLVGTPNYIAPEV 842

  Fly   933 LERSGYTQLCDYWSVGVILYEMLVGQPPFLANSPLETQQKVINWEKTLHIPPQAELSREATDLIR 997
            |.|.|||||||:|||||||:|||||||||||.:|.|||.||||||.|||||.|.:||.||.|||.
  Rat   843 LLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPTQVKLSAEARDLIT 907

  Fly   998 RLCASADKRLGK-SVDEVKSHDFFKGIDFA-DMRKQKAPYIPEIKHPTDTSNFDPVDPEK---LR 1057
            :||.:||.|||: ..|::|:|.||..|||: |:|||.|||:|.|.||.|||||||||.|.   ..
  Rat   908 KLCCAADCRLGRDGADDLKAHPFFSTIDFSRDIRKQPAPYVPTISHPMDTSNFDPVDEESPWHEA 972

  Fly  1058 SNDSTMSSGDDVDQNDR-TFHGFFEFTFRRFFDD----------KQPPDMTDDQ----------- 1100
            |.:|..:.......|.: ..|.|:||||||||||          .:|.:..|..           
  Rat   973 SGESAKAWDTLASPNSKHPEHAFYEFTFRRFFDDNGYPFRCPKPSEPAESADPGDAELGGAVEGC 1037

  Fly  1101 APVYV 1105
            .||||
  Rat  1038 QPVYV 1042

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wtsNP_733403.1 MobB_LATS1 644..718 CDD:439273 50/73 (68%)
STKc_LATS 717..1078 CDD:270749 259/371 (70%)
Lats2NP_001100737.1 UBA_LATS2 101..141 CDD:270581 4/17 (24%)
PHA03247 <143..490 CDD:223021 101/531 (19%)
MobB_LATS2 543..625 CDD:439272 53/81 (65%)
Protein Kinases, catalytic domain 624..1004 CDD:473864 267/381 (70%)

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