DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31371 and p4ha2

DIOPT Version :9

Sequence 1:NP_733375.2 Gene:CG31371 / 43626 FlyBaseID:FBgn0051371 Length:507 Species:Drosophila melanogaster
Sequence 2:XP_005173949.1 Gene:p4ha2 / 373132 ZFINID:ZDB-GENE-030827-1 Length:542 Species:Danio rerio


Alignment Length:537 Identity:135/537 - (25%)
Similarity:233/537 - (43%) Gaps:99/537 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LFLLVESVAGANFARGE-----EQLQALLDTETQLIDGLRDYIERLERQLEEIRRETSAIEEI-H 71
            |..|:.:::.::..|.|     .|:..|:.||.:|:..|::||:..|::||.:|...:.:::: .
Zfish     5 LVFLLSTLSFSSPTRAEIFTSIGQMTNLIFTERELVQSLKEYIQAEEQKLETVRSWANKLDKLTR 69

  Fly    72 SQVDSVEEYMGNPLNVFGILKRFESVWPGLEQKANATLEMVFGERLSDRQLTLPSEEDYEESLNH 136
            :.....|.::.:|:|.:.::||..:.|..||..........|...:|..:...|.|||.:.:...
Zfish    70 TSTSDPEGFLAHPVNAYKLMKRLNTEWSELESLVLQDPSDGFISNMSVHRQYFPDEEDEKGAAKA 134

  Fly   137 LLHLQSVYELDSNSLSLGVV------NGFKLGSSMSWGDCLEVAR----KSDFPVARFWLESALE 191
            ||.||..|:||:.|.|.|.:      :|.:..:.::..||.::.:    .:|:..:..|::.:|.
Zfish   135 LLRLQDTYKLDAESFSKGKLPGQRQHSGVRYNALLTVDDCFDMGKMAYNDNDYYHSVLWMQQSLR 199

  Fly   192 KLPSASENSTESQRERESGRVHILEATLNIEYRAGELSRALATAEELLLLLPMNQGIQKAKRKIE 256
            ::.|..|..|.        :..:|:......|:.|:|.||:.....||.:.|.:|......|..|
Zfish   200 QMDSGEEAKTP--------KADVLDYLSYSVYQMGDLPRAIELTRRLLAIDPSHQRAGGNLRYFE 256

  Fly   257 KAMAKKELPKGRGQKSKA-KKQISKST---------EQLLIEEICRGAKQQVTT--GSRFNHCQL 309
            :.::|:....|:.|...| ::.|...|         |:...|.:|||...::||  .||......
Zfish   257 RLLSKELQDSGQTQPEPADERPIQLDTYQRPKDYLPEREAYEALCRGEGVKMTTKRQSRLFCRYR 321

  Fly   310 DGS-SPWLLLQPSRLEPVSSDPYIVLHHDVLTPKESNELLQLIDEEEDTKGVSYQSLKLSKLAQK 373
            ||: :|.|||:|.:.|.....|:||...:.|    |:|.:|.|.|      ::...|..:.:...
Zfish   322 DGNRNPRLLLKPMKEEDEWDSPHIVRFLEAL----SDEEIQKIKE------IATPKLARATVRDP 376

  Fly   374 KLG-------RISRLLGLEILELDPWTGRRHGH-EHITKLE-HSSELKHVA-------------- 415
            |.|       |:|:...|| .|.||...|.:.. |.||.|. .::||..||              
Zfish   377 KTGVLTVAHYRVSKSAWLE-GEDDPVIARVNQRIEDITGLTVDTAELLQVANYGVGGQYEPHFDF 440

  Fly   416 ----------------------RLMLNLQAPGMGGAVVFPQLELAVNVPRGSLLHWRTRFAGGSS 458
                                  ..|.:::|   |||.|||....:|...:|:.:.|...|..|  
Zfish   441 SRKDEPDAFKSLGTGNRVATYLNYMSDVEA---GGATVFPDFGASVWPRKGTAVFWYNLFRSG-- 500

  Fly   459 SEWDYRSGQAICPVLLG 475
             |.|||:..|.||||:|
Zfish   501 -EGDYRTRHAACPVLVG 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31371NP_733375.2 P4Ha_N 30..156 CDD:285528 36/126 (29%)
p4ha2XP_005173949.1 P4Ha_N 25..154 CDD:285528 36/128 (28%)
P4Hc 353..526 CDD:214780 47/177 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D391515at2759
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.920

Return to query results.
Submit another query.