DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2224 and Stambpl1

DIOPT Version :9

Sequence 1:NP_001263108.1 Gene:CG2224 / 43617 FlyBaseID:FBgn0039773 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_001347645.1 Gene:Stambpl1 / 76630 MGIID:1923880 Length:436 Species:Mus musculus


Alignment Length:431 Identity:178/431 - (41%)
Similarity:252/431 - (58%) Gaps:42/431 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 VEPQERMKHLSHCGNLIEVDKNMPVTRYYRSGTEMLRMANVYLREGNHENAFILYLRYMTLFIEK 77
            :.|:||::.||..|..|.:::::...||:|||.||.|||:|||.|||.||||:||.:::|||:||
Mouse    24 LSPEERVRALSKLGCNISINEDITPRRYFRSGVEMERMASVYLEEGNLENAFVLYNKFITLFVEK 88

  Fly    78 IRQHPDYGSVKA-EVRDINRKIKDEIMPTTEKLRAKLLTHYQREYEQFLASK---EAERVKELER 138
            :..|.||..... |.:||.:|:|:...|.|::|:..||..|..||:::|.||   :||.:|:||.
Mouse    89 LPSHRDYQQCAVPEKQDIMKKLKEIAFPRTDELKTDLLRKYNIEYQEYLQSKNKYKAEILKKLEH 153

  Fly   139 ERERERERQR-------QKERE---------KAGSSAIPSLIPANLHVLID--EGNQPSAPDLGL 185
            :|..|.||||       |.|.|         |....|...:...:..||.:  :|:..|.     
Mouse   154 QRLIEAERQRIAQMRQQQLESEQFLFFEDQLKKQELARGQIRGQDSPVLSEQTDGSALSC----- 213

  Fly   186 LDQVVYPNDFPTGANRSLPGSGLLLPAASEAAADKTTNSKPSFDRNQKP--SYNRTDSLLAGSLR 248
                     |.|..:.||..:....|..|:.:  ...|..|..:|..||  :.:...:|:...||
Mouse   214 ---------FSTHQSNSLRNAFADHPHKSDGS--NFANYSPPVNRALKPAATLSAVQNLVVEGLR 267

  Fly   249 LVYVPGDTMEVFLKLALANTSKNIETCGVLAGHLSQNQLYITHIITPQQQGTPDSCNTMHEEQIF 313
            .|.:..|....||.||.:||.:.|||||:|.|.|:.|:..|||::.|:|...||.|:..:.|::|
Mouse   268 CVVLSRDLCHKFLLLADSNTVRGIETCGILCGKLTHNEFTITHVVVPKQSAGPDYCDVENVEELF 332

  Fly   314 DVQDQMQLITLGWIHTHPTQTAFLSSVDLHTHCSYQIMMPEALAIVCAPKYNTTGFFILTPHYGL 378
            :||||..|:|||||||||||||||||||||||||||:|:|||:||||:||:..||.|.|| :.|:
Mouse   333 NVQDQHGLLTLGWIHTHPTQTAFLSSVDLHTHCSYQLMLPEAIAIVCSPKHKDTGIFRLT-NAGM 396

  Fly   379 DYIAQCRQSGFHPHPNDPPLFMEAQHIRMDNQAKIKVIDLR 419
            ..::.|::.|||||..||.||....|: :....|..|:|||
Mouse   397 LEVSTCKKKGFHPHTKDPKLFSICSHV-LVKDIKTTVLDLR 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2224NP_001263108.1 USP8_dimer 16..119 CDD:286108 47/103 (46%)
MPN_AMSH_like 247..419 CDD:163697 91/171 (53%)
Stambpl1NP_001347645.1 USP8_dimer 28..129 CDD:370218 46/100 (46%)
Tig <119..>195 CDD:223618 25/75 (33%)
MPN_AMSH_like 266..436 CDD:163697 91/171 (53%)
JAMM motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01182 347..360 12/12 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836834
Domainoid 1 1.000 147 1.000 Domainoid score I4492
eggNOG 1 0.900 - - E1_COG1310
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 326 1.000 Inparanoid score I2459
Isobase 1 0.950 - 0 Normalized mean entropy S4988
OMA 1 1.010 - - QHG49824
OrthoDB 1 1.010 - - D411229at2759
OrthoFinder 1 1.000 - - FOG0002716
OrthoInspector 1 1.000 - - otm43492
orthoMCL 1 0.900 - - OOG6_103166
Panther 1 1.100 - - O PTHR12947
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1584
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.720

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