DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2224 and stambpl1

DIOPT Version :9

Sequence 1:NP_001263108.1 Gene:CG2224 / 43617 FlyBaseID:FBgn0039773 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_989010.1 Gene:stambpl1 / 394606 XenbaseID:XB-GENE-5752500 Length:429 Species:Xenopus tropicalis


Alignment Length:438 Identity:171/438 - (39%)
Similarity:251/438 - (57%) Gaps:61/438 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 VEPQERMKHLSHCGNLIEVDKNMPVTRYYRSGTEMLRMANVYLREGNHENAFILYLRYMTLFIEK 77
            :.|:||::.||..|..|.:::::...||:|||.||.|||:|||.|||.||||:||.:::|||:||
 Frog    22 LSPEERVRALSKLGCNITINEDITPRRYFRSGVEMERMASVYLEEGNLENAFVLYNKFITLFVEK 86

  Fly    78 IRQHPDYGSVK-AEVRDINRKIKDEIMPTTEKLRAKLLTHYQREYEQFLA---SKEAERVKELER 138
            :..|.||...: .|.:||.:|:|:...|.|::|:..||..|..||:::|.   .::||.:|:||:
 Frog    87 LPGHRDYQQYEIPEKQDILKKLKEVAFPRTDELKKDLLKKYNLEYQEYLQGVHKRKAECLKKLEQ 151

  Fly   139 ERERERE-------RQRQKEREK--------------------AGSSAIPSLIPANLHVLIDEGN 176
            ::..|.|       ||:|.:.|:                    ..:..:|..|...:...|....
 Frog   152 QQLIEAEKKRLAQIRQQQIQTEQFSFFEDQLRKQDQVRDQLKIKDAPKVPEQIDGGMVTCISNAK 216

  Fly   177 QPSAPDLGLLDQVVYPNDFPTGANRSLPGSGLLLPAASEAAADKTTNSKPSFDRNQKPSYNRTDS 241
            ..........|..:|....|       |.:..|.|||:.:|.           :|:         
 Frog   217 SSCTEQAKRNDASIYTGQSP-------PVTRALKPAATLSAV-----------QNE--------- 254

  Fly   242 LLAGSLRLVYVPGDTMEVFLKLALANTSKNIETCGVLAGHLSQNQLYITHIITPQQQGTPDSCNT 306
             :...||.|.:|.|..:.||:||.||||:.|||||:|.|.|:.::..|||:|.|:|...||.|:.
 Frog   255 -IVDGLRPVVLPRDLSQRFLQLAEANTSRGIETCGILCGKLTHDEFTITHVIVPKQSAGPDYCDM 318

  Fly   307 MHEEQIFDVQDQMQLITLGWIHTHPTQTAFLSSVDLHTHCSYQIMMPEALAIVCAPKYNTTGFFI 371
            .:.|::|:||||..|:|||||||||||||||||||||||||||:|:|||:||||:||:|.||.|.
 Frog   319 ENVEELFNVQDQHNLLTLGWIHTHPTQTAFLSSVDLHTHCSYQLMLPEAIAIVCSPKHNDTGIFR 383

  Fly   372 LTPHYGLDYIAQCRQSGFHPHPNDPPLFMEAQHIRMDNQAKIKVIDLR 419
            || ..|:..::.|::.|||||..:|..|...:|:.:.: |.|.|:|||
 Frog   384 LT-SAGMLEVSACKKKGFHPHSKEPRQFNTCRHVTVQD-AGITVLDLR 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2224NP_001263108.1 USP8_dimer 16..119 CDD:286108 47/103 (46%)
MPN_AMSH_like 247..419 CDD:163697 94/171 (55%)
stambpl1NP_989010.1 USP8_dimer 26..127 CDD:401063 46/100 (46%)
Nop25 132..>207 CDD:401675 14/74 (19%)
MPN_AMSH_like 259..429 CDD:163697 94/171 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 146 1.000 Domainoid score I4514
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 327 1.000 Inparanoid score I2431
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D411229at2759
OrthoFinder 1 1.000 - - FOG0002716
OrthoInspector 1 1.000 - - otm48652
Panther 1 1.100 - - O PTHR12947
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1584
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
88.160

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