DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9747 and Scd3

DIOPT Version :10

Sequence 1:NP_651779.1 Gene:CG9747 / 43591 FlyBaseID:FBgn0039754 Length:461 Species:Drosophila melanogaster
Sequence 2:NP_001419478.1 Gene:Scd3 / 681458 RGDID:1595370 Length:359 Species:Rattus norvegicus


Alignment Length:409 Identity:167/409 - (40%)
Similarity:230/409 - (56%) Gaps:66/409 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 GHLSTSERVCSKTPAIATDSSPPLVARRSKFPNGDAQQQVRRGEDSSPELPPRGKLQL-----PP 61
            |||...|    .||:..|.|:      .::.|:|..|    :|::....||    |.|     |.
  Rat     3 GHLLQEE----MTPSYTTTST------ITEPPSGVMQ----KGKEKLKTLP----LYLEEDIRPE 49

  Fly    62 KREELPRSVVPKEIANHVPKDAIDLE------EYTRTFVGDRVLGWQFQAPLKWDKVIQISLLHI 120
            .||::           |.|... |.|      ||.                  |..:|.::|||:
  Rat    50 MREDI-----------HDPSYQ-DEEGPPPKLEYV------------------WRNIILMALLHV 84

  Fly   121 VA--GICLLTYPLRELNPYTTIWSFFVGGVAGFGVTAGAHRFWTHKSYKANTVLRSILMVCYCVA 183
            .|  ||.|:  |..::  ||.:|:|....::..|:.||.||.|:|::|||...||..|::...:|
  Rat    85 GALYGITLI--PSSKV--YTLLWAFIYYAISIEGIGAGVHRLWSHRTYKARLPLRIFLIIANTMA 145

  Fly   184 GQNTLYDWVRDHRVHHKYSETDADPHNANRGFFFSHVGWLMMLKHPEVLRRGRQIDMSDILADPV 248
            .||.:|:|.||||.|||::||.|||||:.|||||||||||::.|||.|..:|.::||||:.|:.:
  Rat   146 FQNDVYEWARDHRAHHKFTETHADPHNSRRGFFFSHVGWLLVRKHPAVKEKGGKLDMSDLKAEKL 210

  Fly   249 VRFHQKYFIPLKTFFCFILPTVIPVYCWGETWTLAFIQQCLFRYVSSLNFTWSVNSAAHLWGSRP 313
            |.|.::|:.|.....||||||::|.|.||||:..:|....|.||...||.||.|||||||:|.||
  Rat   211 VMFQRRYYKPGILLLCFILPTLVPWYFWGETFLHSFYVATLLRYAVVLNVTWLVNSAAHLYGYRP 275

  Fly   314 YDKRIMPSENIYVSLLAMGEGWHNYHHVFPWDYKAAELGNYTVNFTTMVLDAFHKLGWAWNMKQP 378
            |||.|.|.||..|||..:|||:|||||.||:||.|:|. .:.:||||..:|....||.|::.|:.
  Rat   276 YDKNIDPRENALVSLGTLGEGFHNYHHAFPYDYSASEY-PWHINFTTFFIDCMAFLGLAYDRKRV 339

  Fly   379 SKELVRRTLEKYGDGTHAS 397
            ||..|...:::.|||:|.|
  Rat   340 SKATVLARIKRTGDGSHKS 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9747NP_651779.1 Delta9-FADS-like 135..376 CDD:239582 123/240 (51%)
Scd3NP_001419478.1 Delta9-FADS-like 100..337 CDD:239582 122/237 (51%)

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