DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mlc2 and CMD1

DIOPT Version :10

Sequence 1:NP_524586.1 Gene:Mlc2 / 43587 FlyBaseID:FBgn0002773 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_009667.1 Gene:CMD1 / 852406 SGDID:S000000313 Length:147 Species:Saccharomyces cerevisiae


Alignment Length:147 Identity:49/147 - (33%)
Similarity:82/147 - (55%) Gaps:13/147 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 SVFSQKQIAEFKEAFQLMDADKDGIIGKNDLRAAFDSVGKIANDKELDAMLGE----ASGPINFT 130
            |..:::|||||||||.|.|.|.:|.|..::|.....|:|...::.|::.::.|    .:..|.|:
Yeast     3 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFS 67

  Fly   131 QLLTLFANRMATSGANDEDEVVIAAFKTFD--NDGLIDGDKFREMLMNFGDKFTMKEVDDAYDQM 193
            :.|.|.:.::.   :||.::.::.|||.||  .||||...:.:.:|.:.|:|.|..||||...: 
Yeast    68 EFLALMSRQLK---SNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLRE- 128

  Fly   194 VIDDKNQIDT---AALI 207
            |.|...:|:.   |||:
Yeast   129 VSDGSGEINIQQFAALL 145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mlc2NP_524586.1 PTZ00184 73..213 CDD:185504 48/144 (33%)
CMD1NP_009667.1 PTZ00184 1..145 CDD:185504 48/145 (33%)

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