DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mlc2 and CML11

DIOPT Version :10

Sequence 1:NP_524586.1 Gene:Mlc2 / 43587 FlyBaseID:FBgn0002773 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_188933.1 Gene:CML11 / 821865 AraportID:AT3G22930 Length:173 Species:Arabidopsis thaliana


Alignment Length:148 Identity:51/148 - (34%)
Similarity:79/148 - (53%) Gaps:9/148 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 SQKQIAEFKEAFQLMDADKDGIIGKNDLRAAFDSVGKIANDKELDAMLGE----ASGPINFTQLL 133
            :|:||.||||||.|.|.|.||.|..::|.....|:.:...::||..|:.|    .:|.|.|::.|
plant    29 TQEQIMEFKEAFCLFDKDGDGCITADELATVIRSLDQNPTEQELQDMITEIDSDGNGTIEFSEFL 93

  Fly   134 TLFANRMATSGANDEDEVVIAAFKTFDND--GLIDGDKFREMLMNFGDKFTMKEVDDAYDQMVID 196
            .|.||::..:   |.||.:..|||.||.|  |.|...:.|.:::|.|:|.|.:|||....:..:|
plant    94 NLMANQLQET---DADEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVDQMIKEADLD 155

  Fly   197 DKNQIDTAALIEMLTGKG 214
            ...|::....:.|:...|
plant   156 GDGQVNYDEFVRMMMING 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mlc2NP_524586.1 PTZ00184 73..213 CDD:185504 50/145 (34%)
CML11NP_188933.1 PTZ00184 27..170 CDD:185504 50/143 (35%)

Return to query results.
Submit another query.