DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mlc2 and Myl12b

DIOPT Version :10

Sequence 1:NP_524586.1 Gene:Mlc2 / 43587 FlyBaseID:FBgn0002773 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_059039.2 Gene:Myl12b / 50685 RGDID:628855 Length:172 Species:Rattus norvegicus


Alignment Length:174 Identity:68/174 - (39%)
Similarity:101/174 - (58%) Gaps:6/174 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 SKRASGGSRGSRKSKRAGSSVFSVFSQKQIAEFKEAFQLMDADKDGIIGKNDLRAAFDSVGKIAN 112
            ||:|...:. .::.:||.|:||::|.|.||.||||||.::|.::||.|.|.||.....|:||...
  Rat     3 SKKAKTKTT-KKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPT 66

  Fly   113 DKELDAMLGEASGPINFTQLLTLFANRMATSGANDEDEVVIAAFKTFDND--GLIDGDKFREMLM 175
            |..||||:.||.||||||..||:|..::   ...|.::|:..||..||.:  |.|..|..||:|.
  Rat    67 DAYLDAMMNEAPGPINFTMFLTMFGEKL---NGTDPEDVIRNAFACFDEEATGTIQEDYLRELLT 128

  Fly   176 NFGDKFTMKEVDDAYDQMVIDDKNQIDTAALIEMLTGKGEEEEE 219
            ..||:||.:|||:.|.:..||.|...:......:|....:::::
  Rat   129 TMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRILKHGAKDKDD 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mlc2NP_524586.1 PTZ00184 73..213 CDD:185504 59/141 (42%)
Myl12bNP_059039.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20 5/17 (29%)
PTZ00184 25..163 CDD:185504 59/140 (42%)

Return to query results.
Submit another query.