DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mlc2 and sqh

DIOPT Version :10

Sequence 1:NP_524586.1 Gene:Mlc2 / 43587 FlyBaseID:FBgn0002773 Length:222 Species:Drosophila melanogaster
Sequence 2:XP_309109.2 Gene:sqh / 1270410 VectorBaseID:AGAMI1_002024 Length:183 Species:Anopheles gambiae


Alignment Length:181 Identity:75/181 - (41%)
Similarity:114/181 - (62%) Gaps:11/181 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 SKRASGGSRGS--RKSKRAGSSVFSVFSQKQIAEFKEAFQLMDADKDGIIGKNDLRAAFDSVGKI 110
            |.|.:.|.||:  ::::||.|:||::|.|.|||||||||.::|.::||.|.|:||.....|:||.
Mosquito     2 SSRKTAGRRGTTKKRAQRATSNVFAMFDQAQIAEFKEAFNMIDQNRDGFIEKDDLHDMLASLGKN 66

  Fly   111 ANDKELDAMLGEASGPINFTQLLTLFANRMATSGANDEDEVVIAAFKTFD--NDGLIDGDKFREM 173
            ..::.|:.|:.||.||||||..||||..|:.   ..|.:||:..||..||  |.|:|:.|:.||:
Mosquito    67 PTEEYLEGMMNEAPGPINFTMFLTLFGERLQ---GTDPEEVIKNAFGCFDEENTGVINEDRLREL 128

  Fly   174 LMNFGDKFTMKEVDDAYDQMVIDDKNQI-DTAALIEMLT-GKGEEEEEEAA 222
            |...||:||.::||:.:.:..|  ||.: |......:|. |..:::|:|:|
Mosquito   129 LTTMGDRFTDEDVDEMFREAPI--KNSLFDYIEFTRILKHGAKDKDEQESA 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mlc2NP_524586.1 PTZ00184 73..213 CDD:185504 60/143 (42%)
sqhXP_309109.2 PTZ00184 27..164 CDD:185504 60/141 (43%)

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