DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jasper and Hdgfl3

DIOPT Version :10

Sequence 1:NP_651768.1 Gene:Jasper / 43576 FlyBaseID:FBgn0039743 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_038914.2 Gene:Hdgfl3 / 29877 MGIID:1352760 Length:202 Species:Mus musculus


Alignment Length:152 Identity:50/152 - (32%)
Similarity:73/152 - (48%) Gaps:22/152 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 YSIGDLVFAKVKGYPPWPAKITKSNNN------KKYNVYFYGTGETANIKLEDLFPYASNKERFA 68
            |..|||||||:||||.|||:|.:....      .||.::|:||.|||.:..:|||||...|::|.
Mouse     9 YKAGDLVFAKMKGYPHWPARIDELPEGAVKPPANKYPIFFFGTHETAFLGPKDLFPYKEYKDKFG 73

  Fly    69 TEKIMKRAKFIEAIDQIESALRGEDSAPIDLLDGAEPV----APPTTGDGVKTEEPKPEPGPEPA 129
              |..||..|.|.:.:||       :.|.....|.:.:    :..|.|:|..|.:...|   |..
Mouse    74 --KSNKRKGFNEGLWEIE-------NNPGVKFTGYQTIQQQSSSETEGEGGNTADASSE---EEG 126

  Fly   130 TAAPVAAAAEKPKKSGTRKTKA 151
            ..........|.:|.|:::.|:
Mouse   127 DRVEDGKGKRKNEKGGSKRKKS 148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JasperNP_651768.1 PWWP_HRP 10..86 CDD:438959 36/81 (44%)
LEDGF 320..440 CDD:463284
Hdgfl3NP_038914.2 PWWP_HDGFL3 4..96 CDD:438978 39/95 (41%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 90..202 12/62 (19%)
Nuclear localization signal. /evidence=ECO:0000255 135..147 3/11 (27%)
Blue background indicates that the domain is not in the aligned region.

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