DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jasper and Hdgfl1

DIOPT Version :10

Sequence 1:NP_651768.1 Gene:Jasper / 43576 FlyBaseID:FBgn0039743 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_598233.2 Gene:Hdgfl1 / 171074 RGDID:621012 Length:304 Species:Rattus norvegicus


Alignment Length:313 Identity:84/313 - (26%)
Similarity:124/313 - (39%) Gaps:61/313 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 YSIGDLVFAKVKGYPPWPAKITKSNNNKKYNVYFYGTGETANIKLEDLFPYASNKERFATEKIMK 74
            |..|||||||:|||..|||:|.......:|.|:|:||.|||.:..:.||||..:||||.  |..|
  Rat     9 YKTGDLVFAKLKGYAHWPARIEHVTEPNRYQVFFFGTHETALLGPKHLFPYEESKERFG--KPNK 71

  Fly    75 RAKFIEAIDQIESALRGEDSAPIDLLDGAEPVAPPTTGDGVKTEEPKPEPGPEPA---------- 129
            |..|.|.:.:||.          |.:..|.|...|.. :.:..|||.|...|||.          
  Rat    72 RRGFSEGLWEIEH----------DPMVEASPCLCPDE-EQLCAEEPGPGEEPEPGQELEPESRPE 125

  Fly   130 -TAAPVAAAAEKPKKSGTRK-TKAPPRHVDGDSEAGAELAPPPAKRRVPTEGLATAAAIPAAPAA 192
             .:.|...|..:|:|...:: .:.|.:..:.:.|...||.|.|.....|...       |.....
  Rat   126 LESMPELEAEPRPEKECEQEPEQEPEQEPEQELEQEPELEPEPEPEPEPEPE-------PEPEPE 183

  Fly   193 ATPTSSKKSVKKSKPTAAVTPIQKRSRPVNNIRNEMLMVYMPTAKCLGIVINYKKPESFESAAAE 257
            ..|.......|:........|..:::..|.....|        |:.:.:|   ::|||.:.:|.:
  Rat   184 PQPAYDLLDAKEEPGLIEAEPGDQQAEQVREQHAE--------AEVMAVV---EEPESLKRSAED 237

  Fly   258 EAWMENARKEALELKLKLESGQINP-ESMPDRIVVEPTRSEIPKQEALRFIEE 309
            |               :..|....| |:.|..:.:||....  :.||..|:||
  Rat   238 E---------------QPHSPPKRPREAAPGALEMEPAGER--EAEACPFVEE 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JasperNP_651768.1 PWWP_HRP 10..86 CDD:438959 36/75 (48%)
LEDGF 320..440 CDD:463284
Hdgfl1NP_598233.2 PWWP_HRP 9..85 CDD:438959 38/87 (44%)
Blue background indicates that the domain is not in the aligned region.

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