DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jasper and Psip1

DIOPT Version :10

Sequence 1:NP_651768.1 Gene:Jasper / 43576 FlyBaseID:FBgn0039743 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_598709.1 Gene:Psip1 / 101739 MGIID:2142116 Length:528 Species:Mus musculus


Alignment Length:489 Identity:107/489 - (21%)
Similarity:182/489 - (37%) Gaps:156/489 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 GDLVFAKVKGYPPWPAKI-------TKSNNNKKYNVYFYGTGETANIKLEDLFPYASNKERFATE 70
            |||:|||:||||.|||::       .|...| |..::|:||.|||.:..:|:|||:.|||::.  
Mouse     8 GDLIFAKMKGYPHWPARVDEVPDGAVKPPTN-KLPIFFFGTHETAFLGPKDIFPYSENKEKYG-- 69

  Fly    71 KIMKRAKFIEAIDQIESALRGEDSAPIDLLDGAEPVAPPTTGDGVKTEEPKPEPGPEPATAAPVA 135
            |..||..|.|.:.:|       |:.|                   |.:....:...:.:.|:...
Mouse    70 KPNKRKGFNEGLWEI-------DNNP-------------------KVKFSSQQASTKQSNASSDV 108

  Fly   136 AAAEKPKKSGTRKTKAPPRHVDGDSEAGAELAPPPAKRR---------VPTE--GLATAAAIPAA 189
            ...||........|....:..:.|.....::..|.|.||         |.||  |:.|       
Mouse   109 EVEEKETNVSKEDTDQEEKASNEDVTKAVDITTPKAARRGRKRKAEKQVDTEEAGMVT------- 166

  Fly   190 PAAATPTSSKKSVKKSKPTAAVTPIQK-RSRPVNNIRNEMLMVYMPTAKCLGIVINYKK-----P 248
              |||.::.|.|.|:.:|.|....|.| |.||        .:|..|......:||:..|     |
Mouse   167 --AATASNVKASPKRGRPAATEVKIPKPRGRP--------KVVKQPCPSDGDMVIDEDKSKKKGP 221

  Fly   249 E---------SFESAAAEEAWMENARKE--ALELKLKLES------------------------- 277
            |         ..|....||   |..|||  ..|.|.::||                         
Mouse   222 EEKQPKKQLKKEEEGQKEE---EKPRKEPDKKEGKKEVESKRKNLAKPGVTSTSDSEDEDDQEGE 283

  Fly   278 -------------------GQINPES------MPDRIVVEPTRSEIPKQEALRFIEELIEHEDAL 317
                               ||...|:      ..:::..|....:..|:..::.:|:..|..   
Mouse   284 KKRKGGRNFQAAHRRNMLKGQHEKEAGDRKRKQEEQMETEQQNKDEGKKPEVKKVEKKRETS--- 345

  Fly   318 FMERDFIQLSQQLRECLGLRRANVGKCLEILEQFKEVEFTKLMLLRNPECVDIMRRLRRYVGNLE 382
             |:....::..:::..|.:...:|.:|:|.|::...::.|.....::.|.:..::::||:     
Mouse   346 -MDSRLQRIHAEIKNSLKIDNLDVNRCIEALDELASLQVTMQQAQKHTEMITTLKKIRRF----- 404

  Fly   383 LWKMDLSDEVEFKERAQTIRKVSSGIYDGFKSLF 416
                         :.:|.|.:.|:.:|:.||::|
Mouse   405 -------------KVSQVIMEKSTMLYNKFKNMF 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JasperNP_651768.1 PWWP_HRP 10..86 CDD:438959 34/79 (43%)
LEDGF 320..440 CDD:463284 16/97 (16%)
Psip1NP_598709.1 PWWP_PSIP 5..92 CDD:438979 38/112 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 61..348 66/338 (20%)
Nuclear localization signal. /evidence=ECO:0000250|UniProtKB:O75475 146..156 2/9 (22%)
Integrase-binding domain (IBD). /evidence=ECO:0000250|UniProtKB:O75475 338..415 14/98 (14%)
LEDGF 347..448 CDD:463284 16/97 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 444..528
Blue background indicates that the domain is not in the aligned region.

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