DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7903 and fne

DIOPT Version :10

Sequence 1:NP_651755.2 Gene:CG7903 / 43554 FlyBaseID:FBgn0039730 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_001401058.1 Gene:fne / 32245 FlyBaseID:FBgn0086675 Length:371 Species:Drosophila melanogaster


Alignment Length:92 Identity:24/92 - (26%)
Similarity:41/92 - (44%) Gaps:14/92 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 AKVFVGSLPR-CKPEELRRLFTNYGSVVE----CD----VMNRCAFVHLENTDMAEAAIAALNGT 60
            |.::|..||: ....:|..:|.::|.::.    ||    :.....|:..:..:.||.||..|||.
  Fly   130 ANLYVSGLPKNLSQPDLEGMFASFGKIITSRILCDNISGLSKGVGFIRFDQRNEAERAIQELNGK 194

  Fly    61 IFKG--QPIVVEAGRPKYGPGGGSRGQ 85
            ..||  :||.|:...   .|...::.|
  Fly   195 TPKGYAEPITVKFAN---NPSNSAKAQ 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7903NP_651755.2 RRM_SF 6..70 CDD:473069 20/74 (27%)
PABP-1234 <18..173 CDD:130689 20/78 (26%)
fneNP_001401058.1 ELAV_HUD_SF 23..369 CDD:273741 24/92 (26%)

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