DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7896 and Tlr13

DIOPT Version :10

Sequence 1:NP_651754.1 Gene:CG7896 / 43552 FlyBaseID:FBgn0039728 Length:1392 Species:Drosophila melanogaster
Sequence 2:NP_001395788.1 Gene:Tlr13 / 317227 RGDID:1562655 Length:956 Species:Rattus norvegicus


Alignment Length:791 Identity:198/791 - (25%)
Similarity:330/791 - (41%) Gaps:169/791 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 GQQVLP----------------AQTFGQLKLTIEELDLSYNLIRRIPEKAFDGLKDSLNELRLAN 140
            |..|:|                |:|:|..|.|..|.|:.:....|   |....|.::::::    
  Rat     9 GSSVVPSLQLLLMLIGLSLLSLAETYGFNKCTQYEFDIHHVFCIR---KKITNLTEAISDI---- 66

  Fly   141 NLLGDNLNPIFSTAELHVLKNLRLLDLSGNKIKLIEEGLLKGCMDLKEFYIDRNSLTSVPTNSLN 205
                    |.::|   |       |:|:.|.|:::                        |..|..
  Rat    67 --------PRYTT---H-------LNLTNNYIQVL------------------------PPWSFT 89

  Fly   206 GPSALRHLSLRQNQIGSLLADSFNAQRQLEIIDLRHNVIRSIDSLAFKGLQKIREIKLAGNRISH 270
            ..|||..|.|..|.|..:...:|.....|.:::|..|.|:|::: :|:||..:..:.|:.|:|:|
  Rat    90 NLSALVDLRLEWNLIWKIDEGAFRGLENLTLLNLVENKIQSVNN-SFEGLSNLETLLLSHNQITH 153

  Fly   271 LNSDVFEKLQSLQKLDLSENFFGQFPTV--ALAAVPGLKHLNLSSNMLQQLDYTHMQVVRSLESL 333
            ::.|.|..|..|:.|.||.|....|..:  |:..:|.|:||:|.:|.:..||::...:| ||..|
  Rat   154 IHKDAFTPLVKLKYLSLSRNRISNFSGILEAVQHLPCLEHLDLINNSIMYLDHSPRSLV-SLTHL 217

  Fly   334 DISRNTITTITPGTFREMGALKYLDLSLNSLRTIEDDALEGLDSLQTLIIKDNNILLVPGSALGR 398
            ....|.:|                :|:.::|         .|.:|..|....|...::....|..
  Rat   218 SFEGNNLT----------------ELNFSTL---------SLPNLTNLSASQNGHGVIQDVYLKT 257

  Fly   399 LPQLTSLQLDYN--RVAALSAEILGSLQAGDITTLSLSRN---------VIRELPPGSFQMF--- 449
            ||||.||.|...  ::..|||:.|.:::..|::...|...         ::|.||......|   
  Rat   258 LPQLQSLNLSGTVVKLEMLSAKHLQNVRVMDLSNRELKHGHLNMKIVCYLLRNLPMLEILFFHKN 322

  Fly   450 -------------SSLHTLDLSGNS-LAVINADTFAGLESTLMALKLSQNRLTGLGGAPW-VLPE 499
                         :.|..|||..|| |..:|...|..|.| |..|.|::.:|:.:....| .|..
  Rat   323 ATNAEGIKQLAKCTRLLFLDLGQNSDLVHLNDSEFNALPS-LQRLNLNKCQLSFISNKTWSSLQN 386

  Fly   500 LRSLDLSGNTLTELPSTIFEELENVQSLNLSGNHLTPLTGALFKPLDRLQVIDLSGCNIRQISGD 564
            |..||||.|.....|...|..|:.::.|:||.|.:|.|....|..|..|:.::|:.|.|..|...
  Rat   387 LTILDLSHNKFKSFPDFAFSPLKRLEFLSLSRNPITELNNLAFSGLFSLKELNLAACWIVTIDRY 451

  Fly   565 LLAGLQDLKHIYLNDNQLQELQDGSFVNLWNISSIDLSNNRIGSIRSGAFVNVMKLQKLDLHGNQ 629
            ......:|:.:.|.||.::.|..|:|..|..:.::.||:||:..:.|.||..:..|:.|||..|.
  Rat   452 SFTQFPNLEVLDLGDNNIRTLNHGTFQPLKKLHTLILSHNRLEIMESNAFSGLTGLRYLDLMYNS 516

  Fly   630 LSAFKGEYFNTGTGIEE---LDISDNQLSYLFPSSFRIHP--RLREIRAANNK----------FS 679
            ||.|...:|   .|:|:   |.:..|:::|....:.:..|  :|:.::..|.:          .:
  Rat   517 LSYFHKHHF---MGLEKLLVLKLGFNKITYETTRTLQYPPFMKLKSLKQLNLEGQKHGIQVVPRN 578

  Fly   680 FFPAELISTLQYL-----EHIDLSHNQ---LKTIEELD-----------------FARLPRLRVL 719
            ||..  :|:||.|     ..:.|.|:|   |..:.:||                 |..|.||:||
  Rat   579 FFQG--LSSLQELLLGKNPSVFLDHHQFDPLINLTKLDISGTKDGDRSLYLNSSLFQNLKRLKVL 641

  Fly   720 LVANNQLDMVSEMAFHNSTQLQILDLAHNNLDRIGERTFEGLVRLEQLNLEGNRLSELSDGVFER 784
            .:.||.|:.:....|.:...||:..|..|||..|.:...|.|..|...::.||:|....|.::.:
  Rat   642 RLENNNLESLVPGMFSSLQNLQVFSLRFNNLKVINQSHLENLKSLMFFDVYGNKLQCTCDNLWFK 706

  Fly   785 TKLQMLENINL 795
            ......|.:::
  Rat   707 NWSMNTEEVHI 717

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7896NP_651754.1 PRK15370 20..>410 CDD:185268 80/335 (24%)
leucine-rich repeat 109..132 CDD:275380 5/22 (23%)
leucine-rich repeat 133..161 CDD:275380 3/27 (11%)
leucine-rich repeat 162..185 CDD:275380 4/22 (18%)
leucine-rich repeat 186..209 CDD:275380 2/22 (9%)
leucine-rich repeat 210..233 CDD:275380 6/22 (27%)
leucine-rich repeat 234..257 CDD:275380 8/22 (36%)
PLN00113 237..>750 CDD:215061 156/583 (27%)
leucine-rich repeat 258..281 CDD:275380 7/22 (32%)
leucine-rich repeat 282..329 CDD:275380 16/48 (33%)
leucine-rich repeat 330..353 CDD:275380 4/22 (18%)
leucine-rich repeat 354..377 CDD:275380 3/22 (14%)
leucine-rich repeat 378..401 CDD:275380 5/22 (23%)
leucine-rich repeat 402..425 CDD:275380 8/24 (33%)
leucine-rich repeat 428..451 CDD:275380 5/47 (11%)
leucine-rich repeat 452..473 CDD:275380 9/21 (43%)
leucine-rich repeat 477..497 CDD:275378 5/20 (25%)
leucine-rich repeat 500..523 CDD:275380 9/22 (41%)
leucine-rich repeat 524..547 CDD:275380 8/22 (36%)
leucine-rich repeat 548..571 CDD:275380 5/22 (23%)
leucine-rich repeat 572..595 CDD:275380 8/22 (36%)
leucine-rich repeat 596..619 CDD:275380 7/22 (32%)
leucine-rich repeat 620..643 CDD:275380 9/22 (41%)
leucine-rich repeat 644..667 CDD:275380 5/27 (19%)
leucine-rich repeat 668..691 CDD:275380 6/32 (19%)
LRR <684..1020 CDD:443914 35/137 (26%)
leucine-rich repeat 692..715 CDD:275380 9/47 (19%)
leucine-rich repeat 716..739 CDD:275380 7/22 (32%)
leucine-rich repeat 740..761 CDD:275380 8/20 (40%)
leucine-rich repeat 764..789 CDD:275380 5/24 (21%)
leucine-rich repeat 790..810 CDD:275380 1/6 (17%)
leucine-rich repeat 818..850 CDD:275380
leucine-rich repeat 863..883 CDD:275378
leucine-rich repeat 884..907 CDD:275380
leucine-rich repeat 908..933 CDD:275380
leucine-rich repeat 934..955 CDD:275380
leucine-rich repeat 958..982 CDD:275380
leucine-rich repeat 983..1055 CDD:275380
leucine-rich repeat 1009..1033 CDD:275380
leucine-rich repeat 1058..1085 CDD:275380
LRRCT 1121..1168 CDD:214507
Tlr13NP_001395788.1 leucine-rich repeat 47..69 CDD:275380 4/36 (11%)
LRR 54..435 CDD:443914 113/454 (25%)
leucine-rich repeat 70..93 CDD:275380 8/56 (14%)
leucine-rich repeat 94..117 CDD:275380 6/22 (27%)
leucine-rich repeat 118..140 CDD:275380 8/22 (36%)
leucine-rich repeat 141..164 CDD:275380 7/22 (32%)
leucine-rich repeat 165..190 CDD:275380 7/24 (29%)
leucine-rich repeat 191..213 CDD:275380 8/22 (36%)
leucine-rich repeat 214..236 CDD:275380 7/46 (15%)
leucine-rich repeat 237..260 CDD:275380 5/22 (23%)
leucine-rich repeat 261..283 CDD:275380 8/21 (38%)
LRR 299..697 CDD:443914 109/403 (27%)
leucine-rich repeat 338..362 CDD:275380 10/23 (43%)
leucine-rich repeat 363..386 CDD:275380 6/22 (27%)
leucine-rich repeat 387..410 CDD:275380 9/22 (41%)
leucine-rich repeat 411..434 CDD:275380 8/22 (36%)
leucine-rich repeat 435..458 CDD:275380 5/22 (23%)
leucine-rich repeat 459..482 CDD:275380 8/22 (36%)
leucine-rich repeat 483..506 CDD:275380 7/22 (32%)
leucine-rich repeat 507..530 CDD:275380 10/25 (40%)
leucine-rich repeat 531..585 CDD:275380 8/55 (15%)
leucine-rich repeat 638..661 CDD:275380 7/22 (32%)
leucine-rich repeat 662..683 CDD:275380 8/20 (40%)
TIR 799..943 CDD:214587
Blue background indicates that the domain is not in the aligned region.

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