DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7896 and Lrrtm3

DIOPT Version :10

Sequence 1:NP_651754.1 Gene:CG7896 / 43552 FlyBaseID:FBgn0039728 Length:1392 Species:Drosophila melanogaster
Sequence 2:NP_001099857.1 Gene:Lrrtm3 / 294380 RGDID:1304866 Length:582 Species:Rattus norvegicus


Alignment Length:391 Identity:105/391 - (26%)
Similarity:168/391 - (42%) Gaps:82/391 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   176 EEGLLKGC-MDLKEFYIDRNSLTSVPTNSLNGPSALRHLSLRQNQIGSLLADSFNAQRQLEIIDL 239
            |.|..||| .:.|..|.:...|..:|::...|   ...||||.|.:..|..:.|....||..:.|
  Rat    31 ERGCPKGCRCEGKMVYCESQKLQEIPSSISAG---CLGLSLRYNSLQKLKYNQFKGLNQLTWLYL 92

  Fly   240 RHNVIRSIDSLAFKGLQKIREIKLAGNRISHLNSDVFEKLQSLQKLDLSENFFGQFPTVALAAVP 304
            .||.|.:||..||.|:::::|:.|:.||||:..::.|..:.:|:.||                  
  Rat    93 DHNHISNIDENAFNGIRRLKELILSSNRISYFLNNTFRPVTNLRNLD------------------ 139

  Fly   305 GLKHLNLSSNMLQQLDYTHMQVVRSLESLDISRNTITTITPGTFREMGALKYLDLSLNSLRTIED 369
                  ||.|.|..|.....:.:|.|.||.:..|::.||....|::...|:.|||..|.:|::..
  Rat   140 ------LSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLELLDLGYNRIRSLAR 198

  Fly   370 DALEGLDSLQTLIIKDN-----NILLVPGSALGRLPQLTSLQLDYNRVAALSAEILGSLQAGDIT 429
            :...|:..|:.|.::.|     |:.|.|     ||..|.:|.:.:|:::     ::|.       
  Rat   199 NVFAGMIRLKELHLEHNQFSKLNLALFP-----RLVSLQNLYMQWNKIS-----VIGQ------- 246

  Fly   430 TLSLSRNVIRELPPGSFQMFSSLHTLDLSGNSLAVINADTFAGLESTLMALKLSQNRLTGLGGA- 493
            |:|.:              :|||..||||||.:...:..:.......|..|.|..|:||.:|.. 
  Rat   247 TMSWT--------------WSSLQRLDLSGNEIEAFSGPSVFQCVPNLQRLNLDSNKLTFIGQEI 297

  Fly   494 --PWVLPELRSLDLSGNTLTELPSTIFEELENVQSL-----NLSGNHLTPLTGALFKPLDRLQVI 551
              .|:  .|..:.|:||        |:|...|:.||     :..|.....:..|..|.|..:.||
  Rat   298 LDSWI--SLNDISLAGN--------IWECSRNICSLVNWLKSFKGLRENTILCASPKELQGVNVI 352

  Fly   552 D 552
            |
  Rat   353 D 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7896NP_651754.1 PRK15370 20..>410 CDD:185268 68/239 (28%)
leucine-rich repeat 109..132 CDD:275380
leucine-rich repeat 133..161 CDD:275380
leucine-rich repeat 162..185 CDD:275380 5/9 (56%)
leucine-rich repeat 186..209 CDD:275380 5/22 (23%)
leucine-rich repeat 210..233 CDD:275380 7/22 (32%)
leucine-rich repeat 234..257 CDD:275380 10/22 (45%)
PLN00113 237..>750 CDD:215061 86/329 (26%)
leucine-rich repeat 258..281 CDD:275380 7/22 (32%)
leucine-rich repeat 282..329 CDD:275380 8/46 (17%)
leucine-rich repeat 330..353 CDD:275380 7/22 (32%)
leucine-rich repeat 354..377 CDD:275380 7/22 (32%)
leucine-rich repeat 378..401 CDD:275380 8/27 (30%)
leucine-rich repeat 402..425 CDD:275380 4/22 (18%)
leucine-rich repeat 428..451 CDD:275380 2/22 (9%)
leucine-rich repeat 452..473 CDD:275380 7/20 (35%)
leucine-rich repeat 477..497 CDD:275378 8/22 (36%)
leucine-rich repeat 500..523 CDD:275380 6/22 (27%)
leucine-rich repeat 524..547 CDD:275380 6/27 (22%)
leucine-rich repeat 548..571 CDD:275380 3/5 (60%)
leucine-rich repeat 572..595 CDD:275380
leucine-rich repeat 596..619 CDD:275380
leucine-rich repeat 620..643 CDD:275380
leucine-rich repeat 644..667 CDD:275380
leucine-rich repeat 668..691 CDD:275380
LRR <684..1020 CDD:443914
leucine-rich repeat 692..715 CDD:275380
leucine-rich repeat 716..739 CDD:275380
leucine-rich repeat 740..761 CDD:275380
leucine-rich repeat 764..789 CDD:275380
leucine-rich repeat 790..810 CDD:275380
leucine-rich repeat 818..850 CDD:275380
leucine-rich repeat 863..883 CDD:275378
leucine-rich repeat 884..907 CDD:275380
leucine-rich repeat 908..933 CDD:275380
leucine-rich repeat 934..955 CDD:275380
leucine-rich repeat 958..982 CDD:275380
leucine-rich repeat 983..1055 CDD:275380
leucine-rich repeat 1009..1033 CDD:275380
leucine-rich repeat 1058..1085 CDD:275380
LRRCT 1121..1168 CDD:214507
Lrrtm3NP_001099857.1 LRRNT 33..61 CDD:214470 8/27 (30%)
LRR 59..339 CDD:443914 90/347 (26%)
LRR 1 61..83 8/24 (33%)
leucine-rich repeat 66..86 CDD:275380 7/19 (37%)
LRR 2 84..107 10/22 (45%)
leucine-rich repeat 87..110 CDD:275380 10/22 (45%)
LRR 3 109..131 7/21 (33%)
leucine-rich repeat 111..134 CDD:275380 7/22 (32%)
LRR 4 132..155 8/46 (17%)
leucine-rich repeat 135..158 CDD:275380 8/46 (17%)
LRR 5 156..179 8/22 (36%)
leucine-rich repeat 159..182 CDD:275380 7/22 (32%)
LRR 6 181..203 6/21 (29%)
leucine-rich repeat 183..206 CDD:275380 7/22 (32%)
LRR 7 205..227 6/26 (23%)
leucine-rich repeat 207..230 CDD:275380 8/27 (30%)
LRR 8 229..251 6/33 (18%)
leucine-rich repeat 231..254 CDD:275380 6/48 (13%)
LRR 9 252..276 9/23 (39%)
leucine-rich repeat 255..279 CDD:275380 7/23 (30%)
LRR 10 277..300 7/22 (32%)
leucine-rich repeat 280..300 CDD:275380 7/19 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 378..411
Blue background indicates that the domain is not in the aligned region.

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