DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7896 and lrrn3a

DIOPT Version :10

Sequence 1:NP_651754.1 Gene:CG7896 / 43552 FlyBaseID:FBgn0039728 Length:1392 Species:Drosophila melanogaster
Sequence 2:XP_021329535.1 Gene:lrrn3a / 101887059 ZFINID:ZDB-GENE-061220-7 Length:691 Species:Danio rerio


Alignment Length:766 Identity:165/766 - (21%)
Similarity:303/766 - (39%) Gaps:179/766 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   362 NSLRTIEDDALEGLDSLQTLIIKDNNILLVPGSALGR-------LPQLTSLQLDYNRVAALSAEI 419
            |...|::.:.| ||.:|...:..|..:||...:::.:       |..||.:.|..|.:::||...
Zfish    48 NEAPTVDCNDL-GLLTLPERLPSDTQVLLSQANSIAKIDSPLDYLVNLTEVDLSRNNISSLSDIY 111

  Fly   420 LGSLQAGDITTLSLSRNVIRELPPGSFQMFSSLHTLDLSGNSLAVINADTFAGLESTLMALKLSQ 484
            :|.:.  .:.:|.|..|.:..|.......|.:|..|.::.|.|::|:|:.|.||.          
Zfish   112 IGHIP--QLLSLHLEENWLSSLHDNFLAHFPNLQELYVNHNLLSLISAEAFQGLN---------- 164

  Fly   485 NRLTGLGGAPWVLPELRSLDLSGNTLTELPSTIFEELENVQSLNLSGNHLTPLTGALFKPLDRLQ 549
                          :|..|.|:.|.|..:.|..|::|..::.|.:..|.:..:....||||..|:
Zfish   165 --------------KLLRLHLNSNQLRAIRSEWFQDLSQLEILMIGENPIARIQNMNFKPLINLR 215

  Fly   550 VIDLSGCNIRQISGDLLAGLQDLKHIYLNDNQLQELQDGSFVNLWNISSIDLSNNRIGSIRSGAF 614
            .:.|:..|:.:|....|.||..|:.:...||...::...:...:.|:..:||:.|.|..|:.|.|
Zfish   216 SLVLTRMNLTEIPDSALVGLDKLESVSFYDNMFPKVPQAALRQVRNLKFLDLNKNPIERIQRGDF 280

  Fly   615 VNVMKLQKLDLHGNQLSAFKGEYFNTGTGIEELDISDNQLSYLFPSSFRIH--PRLREIRAANN- 676
            |:::.|::|.::                .:.||...|         ||.:|  |.|.:|.|.|| 
Zfish   281 VDMIHLKELGIN----------------SMPELVSID---------SFALHNLPELTKIEATNNP 320

  Fly   677 KFSFFPAELISTLQYLEHIDLSHNQLKTIEELDFARLPRLRVLLVANNQL--DMVSEMAFHNSTQ 739
            :.|:......|.|..||.:.|:.|.|:.:..:....||.|:.:.:.:|.:  |.|......|:|:
Zfish   321 RLSYIHPNAFSQLPRLESLMLNSNALRALHHITVESLPNLQEVSIHSNPIYCDCVIRWINMNNTR 385

  Fly   740 LQILDLAHNNLDRIGERTFEG-LVRLEQLNLEGNRLSELSDGVFERTKLQMLENINLAHNRFEYA 803
            ::.::|  :.|...|...||| ||:    .:....::::...:.....|....|:...|      
Zfish   386 VRFMEL--DALLCAGPSEFEGRLVK----QVHSREMADICLPLISPESLPDQVNVGTGH------ 438

  Fly   804 PLNALQRQFFF-----VSSVDLSHNKIKELPGDDSIMVNIKRIDLSFNPLSSKAVHNVL-NEPKT 862
             |.:|..:.|.     :..|..|..||  ||..||     |:..|  :|..:..::.:. ||   
Zfish   439 -LVSLHCRAFADPEPEIYWVTPSGEKI--LPQMDS-----KKYHL--HPEGTFDIYGITENE--- 490

  Fly   863 VRELSLAGTGIENLELLETPFLQFLNLSHN----KLKNVKPEVFQRVTLL--ETLDLSSNQLESL 921
                  ||              |:..::||    .:::|...|.....||  |:|.:   |:|:.
Zfish   491 ------AG--------------QYTCVAHNLIGVDMRSVLVIVNGYYPLLVNESLHI---QVENT 532

  Fly   922 E--DLSMAW--PQLQVLQSLDVSNN----SFEIVSQ--SNFGKLEMLRSLRLSHLPQCTRIEKNA 976
            |  .:|::|  |:..::.::..|.|    |.:..|.  ||..|..:.....|:....|..|....
Zfish   533 EPNSVSISWVPPKGSLVSNIKWSTNSQHHSLQFTSHVVSNVKKFNLTNLHSLTQYEVCVEITDMQ 597

  Fly   977 FKQLPNLVSLEAYDLPLLGYLDL--QGILELLPGLEVLDIEVKDSSIGSEQIQPLKHPRLKSLGI 1039
            .:.|.|.:::...::......|:  .|::..|..:.::                           
Zfish   598 SRHLKNCINVTTTEVSKRKNDDVINDGLIISLTAVLLI--------------------------- 635

  Fly  1040 RGDRLKSISSGTLAGLKSND-LSVQLRNTSLNALPPALLFPVPRSSHLSLN 1089
                :.:::...:..|:.|| |..:|||.....||          ||:..|
Zfish   636 ----MSAVACSFICMLRRNDPLYRKLRNQQSEILP----------SHIKPN 672

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7896NP_651754.1 PRK15370 20..>410 CDD:185268 13/54 (24%)
leucine-rich repeat 109..132 CDD:275380
leucine-rich repeat 133..161 CDD:275380
leucine-rich repeat 162..185 CDD:275380
leucine-rich repeat 186..209 CDD:275380
leucine-rich repeat 210..233 CDD:275380
leucine-rich repeat 234..257 CDD:275380
PLN00113 237..>750 CDD:215061 95/399 (24%)
leucine-rich repeat 258..281 CDD:275380
leucine-rich repeat 282..329 CDD:275380
leucine-rich repeat 330..353 CDD:275380
leucine-rich repeat 354..377 CDD:275380 5/14 (36%)
leucine-rich repeat 378..401 CDD:275380 5/29 (17%)
leucine-rich repeat 402..425 CDD:275380 7/22 (32%)
leucine-rich repeat 428..451 CDD:275380 5/22 (23%)
leucine-rich repeat 452..473 CDD:275380 7/20 (35%)
leucine-rich repeat 477..497 CDD:275378 0/19 (0%)
leucine-rich repeat 500..523 CDD:275380 8/22 (36%)
leucine-rich repeat 524..547 CDD:275380 6/22 (27%)
leucine-rich repeat 548..571 CDD:275380 7/22 (32%)
leucine-rich repeat 572..595 CDD:275380 3/22 (14%)
leucine-rich repeat 596..619 CDD:275380 8/22 (36%)
leucine-rich repeat 620..643 CDD:275380 2/22 (9%)
leucine-rich repeat 644..667 CDD:275380 6/24 (25%)
leucine-rich repeat 668..691 CDD:275380 8/23 (35%)
LRR <684..1020 CDD:443914 74/362 (20%)
leucine-rich repeat 692..715 CDD:275380 6/22 (27%)
leucine-rich repeat 716..739 CDD:275380 5/24 (21%)
leucine-rich repeat 740..761 CDD:275380 6/21 (29%)
leucine-rich repeat 764..789 CDD:275380 1/24 (4%)
leucine-rich repeat 790..810 CDD:275380 4/19 (21%)
leucine-rich repeat 818..850 CDD:275380 11/31 (35%)
leucine-rich repeat 863..883 CDD:275378 2/19 (11%)
leucine-rich repeat 884..907 CDD:275380 5/26 (19%)
leucine-rich repeat 908..933 CDD:275380 9/30 (30%)
leucine-rich repeat 934..955 CDD:275380 6/26 (23%)
leucine-rich repeat 958..982 CDD:275380 4/23 (17%)
leucine-rich repeat 983..1055 CDD:275380 3/73 (4%)
leucine-rich repeat 1009..1033 CDD:275380 0/23 (0%)
leucine-rich repeat 1058..1085 CDD:275380 8/27 (30%)
LRRCT 1121..1168 CDD:214507
lrrn3aXP_021329535.1 leucine-rich repeat 52..73 CDD:275380 6/21 (29%)
LRR <56..>276 CDD:443914 58/246 (24%)
leucine-rich repeat 74..93 CDD:275380 3/18 (17%)
leucine-rich repeat 94..117 CDD:275380 7/24 (29%)
leucine-rich repeat 118..141 CDD:275380 5/22 (23%)
leucine-rich repeat 142..165 CDD:275380 9/46 (20%)
leucine-rich repeat 166..189 CDD:275380 8/22 (36%)
leucine-rich repeat 190..213 CDD:275380 6/22 (27%)
leucine-rich repeat 214..237 CDD:275380 7/22 (32%)
leucine-rich repeat 238..261 CDD:275380 3/22 (14%)
leucine-rich repeat 262..285 CDD:275380 8/22 (36%)
leucine-rich repeat 286..310 CDD:275380 8/48 (17%)
LRR_8 309..370 CDD:404697 18/60 (30%)
leucine-rich repeat 311..333 CDD:275380 7/21 (33%)
leucine-rich repeat 336..359 CDD:275378 6/22 (27%)
leucine-rich repeat 360..372 CDD:275378 2/11 (18%)
LRRCT 368..412 CDD:214507 13/49 (27%)
Ig 421..513 CDD:472250 25/130 (19%)
Ig strand B 440..444 CDD:409421 1/3 (33%)
Ig strand C 453..457 CDD:409421 0/3 (0%)
Ig strand E 479..483 CDD:409421 0/3 (0%)
Ig strand F 493..498 CDD:409421 1/4 (25%)
Ig strand G 506..509 CDD:409421 0/2 (0%)
FN3 526..>591 CDD:238020 14/67 (21%)
Blue background indicates that the domain is not in the aligned region.

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