DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jon99Ci and Mcpt1

DIOPT Version :10

Sequence 1:NP_524555.1 Gene:Jon99Ci / 43545 FlyBaseID:FBgn0003358 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_742041.1 Gene:Mcpt1 / 29266 RGDID:621058 Length:247 Species:Rattus norvegicus


Alignment Length:239 Identity:71/239 - (29%)
Similarity:110/239 - (46%) Gaps:31/239 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 GGIEGRITNGNLASEGQVPYIVGVSL-NSNGNWWWCGGSIIGHTWVLTAAHCTAGADEASLYYGA 98
            ||:|. |.:..       ||:..:.: ...|....|||.:|...:|||||||.  ..|.::..||
  Rat    23 GGVES-IPHSR-------PYMAHLDIVTEKGLRVICGGFLISRQFVLTAAHCK--GREITVILGA 77

  Fly    99 VNYNE-PAFRHTVSSENFIRYPHYVGLD--HDLALIK-TPHVDFYSLVNKIELPSLDDRYNSYEN 159
            .:..: .:.:..:..|..|.:..|..:.  ||:.|:| ...|:....||.:.|||..|..:....
  Rat    78 HDVRKRESTQQKIKVEKQIIHESYNSVPNLHDIMLLKLEKKVELTPAVNVVPLPSPSDFIHPGAM 142

  Fly   160 NWVQAAGWG--AIYDGSNVVEDLRVVDLKVISVAECQAYYGTDTASENTICVETPDG-KATCQGD 221
            .|  |||||  .:.|.::..  ||.|:|:::....|..|...:...:  :||.:|.. :|...||
  Rat   143 CW--AAGWGKTGVRDPTSYT--LREVELRIMDEKACVDYRYYEYKFQ--VCVGSPTTLRAAFMGD 201

  Fly   222 SGGPLVTKEGDKLIGITSFVSAYG-CQVGGPAGFTRVTKYLEWI 264
            |||||:      ..|:...:.:|| .....||.||||:.|:.||
  Rat   202 SGGPLL------CAGVAHGIVSYGHPDAKPPAIFTRVSTYVPWI 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon99CiNP_524555.1 Tryp_SPc 41..266 CDD:238113 68/233 (29%)
Mcpt1NP_742041.1 Tryp_SPc 21..242 CDD:238113 71/239 (30%)

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