DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jon99Ci and gzm3.4

DIOPT Version :10

Sequence 1:NP_524555.1 Gene:Jon99Ci / 43545 FlyBaseID:FBgn0003358 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_001108167.1 Gene:gzm3.4 / 100001210 ZFINID:ZDB-GENE-070912-136 Length:251 Species:Danio rerio


Alignment Length:246 Identity:69/246 - (28%)
Similarity:112/246 - (45%) Gaps:24/246 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 IRHGGIEGRITNGNLASEGQVPYIVGVSLNSNGNWWWCGGSIIGHTWVLTAAHCTAGADEASLYY 96
            |:.||:|..|..|........||:..:.:....|   |||.:|...:|||:|||........:..
Zfish    16 IKTGGMESGIVGGREVKLHSRPYMASLQVQRKHN---CGGILIKEDYVLTSAHCWKDTTNLEVVL 77

  Fly    97 GAVNYNE-PAFRHTVSSENFIRYPHYVGLDH--DLAL--IKTPHVDFYSLVNKIELPSLDDRYNS 156
            ||.|.:: ...:..:..:.:|::|:|...:|  |:.|  :||..| ....||...||       .
Zfish    78 GAHNISQRENSQQIIQVQKYIKHPNYQKKNHSFDIMLLKLKTKAV-LNHFVNITNLP-------K 134

  Fly   157 YENNWV-----QAAGWGAIYDGSNVVEDLRVVDLKVISVAECQAYYGTDTASENTICVETPDGKA 216
            :|.:.:     ..||||....|......||.|:|::.|.:.|::.:.....|:|.:|..:...||
Zfish   135 HEPSILAPVECSIAGWGMQRPGEGASNVLREVNLQLESNSYCKSKWQVYFNSKNMVCTASDGKKA 199

  Fly   217 TCQGDSGGPLVTKEGDKLIGITSFVSAYGCQVGG-PAGFTRVTKYLEWIKE 266
            .||||||.||..  ..:|.|:.::.....|.... |..:.:|:.:|.|||:
Zfish   200 FCQGDSGSPLFC--NSELYGMAAYTYPNNCTFKEYPEVYMKVSAFLPWIKK 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon99CiNP_524555.1 Tryp_SPc 41..266 CDD:238113 64/235 (27%)
gzm3.4NP_001108167.1 Tryp_SPc 25..249 CDD:238113 65/237 (27%)

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