DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jon99Ciii and CG5390

DIOPT Version :10

Sequence 1:NP_733330.1 Gene:Jon99Ciii / 43543 FlyBaseID:FBgn0003357 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_609374.1 Gene:CG5390 / 34383 FlyBaseID:FBgn0032213 Length:406 Species:Drosophila melanogaster


Alignment Length:251 Identity:72/251 - (28%)
Similarity:117/251 - (46%) Gaps:56/251 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 GKVPYIVGLL-FSGNGNWW-CGGSIIGNTWVLTAAHCTNG--ASGVTINYG-------ASIRT-Q 97
            |:.|:::.:| ..||.|.: |||::|....|||||||.:.  .|.:.:..|       ..||. :
  Fly   158 GEFPWMLAILREEGNLNLYECGGALIAPNVVLTAAHCVHNKQPSSIVVRAGEWDTQTQTEIRRHE 222

  Fly    98 PQYTHWVGSGDIIQHHHYNSGNLHNDIS--LIRTPHVDFWSLVNKVE---LPSYNDRYQDYAGWW 157
            .:|..     :||.|..:|.|:|:||::  |:.:|    ::|...::   ||:..|:: |:...:
  Fly   223 DRYVK-----EIIYHEQFNKGSLYNDVAVMLLESP----FTLQENIQTVCLPNVGDKF-DFDRCY 277

  Fly   158 AVASGWG-------GTYDGSPLPDWLQSVDVQIISQSDC---------SRTWSLHDNMICINTDG 206
              |:|||       |.|...     |:.||:.::.:..|         .|.:.|||:.||...:.
  Fly   278 --ATGWGKNKFGKDGEYQVI-----LKKVDMPVVPEQQCETNLRETRLGRHFILHDSFICAGGEK 335

  Fly   207 GKSTCGGDSGGPLV---THDGNRL--VGVTSFGSAAGCQSGAPAVFSRVTGYLDWI 257
            .|.||.||.|.|||   ....||.  .|:.::|...| :...|.|::.|.....||
  Fly   336 DKDTCKGDGGSPLVCPIAGQKNRFKSAGIVAWGIGCG-EVNIPGVYASVAKLRPWI 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon99CiiiNP_733330.1 Tryp_SPc 36..260 CDD:238113 72/251 (29%)
CG5390NP_609374.1 CLIP_1 64..115 CDD:465709
Tryp_SPc 153..390 CDD:214473 70/249 (28%)
Blue background indicates that the domain is not in the aligned region.

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