DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jon99Ciii and Tpsb2

DIOPT Version :10

Sequence 1:NP_733330.1 Gene:Jon99Ciii / 43543 FlyBaseID:FBgn0003357 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_062053.2 Gene:Tpsb2 / 29268 RGDID:3065 Length:274 Species:Rattus norvegicus


Alignment Length:283 Identity:93/283 - (32%)
Similarity:129/283 - (45%) Gaps:44/283 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKLFVFLALAVAAATAVPAPAQKLTPTPIKDIQGRITNGYPAYEGKVPYIVGLLFSGNGNWW--- 62
            :||.:.|||:..|:....||.      |:|...| |..|..|.|.|.|:.|.|.|  ..::|   
  Rat     2 LKLLLLLALSPLASLVHAAPC------PVKQRVG-IVGGREASESKWPWQVSLRF--KFSFWMHF 57

  Fly    63 CGGSIIGNTWVLTAAHCTNGASGVTINYGASIRTQ--PQYTHWVGS----GDIIQHHHYNSGNLH 121
            ||||:|...||||||||.    |:.|......|.|  .||.::...    ...:.|.||.:....
  Rat    58 CGGSLIHPQWVLTAAHCV----GLHIKSPELFRVQLREQYLYYADQLLTVNRTVVHPHYYTVEDG 118

  Fly   122 NDISLIRTPH-VDFWSLVNKVELPSYNDRYQDYAGWWAVASGWGGTYDGSPL--PDWLQSVDVQI 183
            .||:|:...: |:..:.::...||..::.:......|  .:|||......||  |..|:.|.|.|
  Rat   119 ADIALLELENPVNVSTHIHPTSLPPASETFPSGTSCW--VTGWGDIDSDEPLLPPYPLKQVKVPI 181

  Fly   184 ISQSDCSRTWS-----------LHDNMICINTDGGKSTCGGDSGGPLVTH-DGNRL-VGVTSFGS 235
            :..|.|.|.:.           :.|.|:|.......| |.||||||||.. .|..| .||.|:|.
  Rat   182 VENSLCDRKYHTGLYTGDDVPIVQDGMLCAGNTRSDS-CQGDSGGPLVCKVKGTWLQAGVVSWGE 245

  Fly   236 AAGC-QSGAPAVFSRVTGYLDWI 257
              || ::..|.:::|||.|||||
  Rat   246 --GCAEANRPGIYTRVTYYLDWI 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon99CiiiNP_733330.1 Tryp_SPc 36..260 CDD:238113 82/248 (33%)
Tpsb2NP_062053.2 Tryp_SPc 30..268 CDD:238113 82/248 (33%)

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