DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31038 and lmgB

DIOPT Version :10

Sequence 1:NP_001400985.1 Gene:CG31038 / 43535 FlyBaseID:FBgn0051038 Length:787 Species:Drosophila melanogaster
Sequence 2:NP_001097124.1 Gene:lmgB / 44128 FlyBaseID:FBgn0085470 Length:365 Species:Drosophila melanogaster


Alignment Length:308 Identity:87/308 - (28%)
Similarity:120/308 - (38%) Gaps:86/308 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   487 LPPLPKSL---------IGFNKLLCSDS---GLLSDVEG------NNNSSDGSRKPNDNLAVETQ 533
            ||||||||         ||.:....|.:   ..|:...|      :.:||..||..:.|....:|
  Fly    16 LPPLPKSLSAATAAPVAIGPHPRTASPASSVNALTVAAGELYLGPSTSSSAASRNRSYNGHGHSQ 80

  Fly   534 DTKEHATDKSLPSSPNGNTSIPPMLVAKSEAKSPSLSAKGNPQAVEAGSTLDAQIATLRKEMNGL 598
               .|.:..|...|.:...|:.....:...|.:.......:.......||:|.|:|.||:||.||
  Fly    81 ---RHGSLSSTQESLSDRESVHSRASSTHSAGAVHTPTNSSSSTGATSSTIDNQLAILRREMYGL 142

  Fly   599 RQLDLSLLSQLWVLNESIQEFRALIEDQE-----------------NEDEDDE---VEVEVGNEL 643
            ||||||||||||.||||||.||..:::|:                 :.||:|:   ..|.:....
  Fly   143 RQLDLSLLSQLWALNESIQGFRVFLQEQDALSPPSRSRTPSDANSLSSDEEDDGSYAPVALPKMT 207

  Fly   644 DEEG-------NSRV------------------SSSIESVRLEGGADGTSKHLGTIPKVITTQPK 683
            |..|       |||.                  ::|..|.....||.|:|....::.|....|.:
  Fly   208 DTAGAGSAGVVNSRAMASPAASGGLPTKLATGSTTSHASTSSTSGASGSSSAASSMGKHQQVQQQ 272

  Fly   684 VLRDSLATASKDQKPVP--------------------RMRSAPPPPPP 711
            ..:.|.:.....|:|.|                    |||.|||||||
  Fly   273 QQQQSQSANHYHQRPAPPPAPPAQHKAHPQLPRILQQRMRQAPPPPPP 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31038NP_001400985.1 PTZ00459 <447..>587 CDD:185638 27/117 (23%)
lmgBNP_001097124.1 None

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