DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15514 and Zbed4

DIOPT Version :10

Sequence 1:NP_651739.1 Gene:CG15514 / 43531 FlyBaseID:FBgn0039712 Length:309 Species:Drosophila melanogaster
Sequence 2:NP_001128272.1 Gene:Zbed4 / 315211 RGDID:1305949 Length:1170 Species:Rattus norvegicus


Alignment Length:234 Identity:63/234 - (26%)
Similarity:94/234 - (40%) Gaps:55/234 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 CKHCEKTLSSKHT----SSNLTRHLIRNHKLLARSIFAGEEGKMLAELKDELEASASEDLSMELG 82
            |::|...:|....    :|.|.|||.|.|.            :::...||.|..|.:......|.
  Rat   479 CRYCSCVISRGKKGDVGTSCLMRHLYRRHP------------EVVGNQKDFLGTSLANSPYATLA 531

  Fly    83 EGETKSAVRGIMNA--KLEQEQMERHSQEEMRNKVIGKNNKLWAHFIRISEFMAK--CMHCGKTL 143
            ..|:.|.:..:..|  |..|.....:|:         |.:|||.||...|....|  |:|||:|:
  Rat   532 SAESSSKLTDLPAAIRKNHQGMFPTNSK---------KTSKLWNHFSICSADSTKVVCLHCGRTI 587

  Fly   144 SSKHSSSN-----LMRHIVRRHTSLAK------TLNHSHQHLMTPKKDSYASLERRQAA---DPL 194
            |.....:|     |:||:.|.|..:.|      ||.||      |.......:|...|:   |..
  Rat   588 SRGKKPTNLGTSCLLRHLQRFHGHVLKNDVSEATLPHS------PGIRRPLGMELSGASSLRDST 646

  Fly   195 EKVNFDDVDSIIEKVADHLEEEVTSISLQEPFYEYVVDN 233
            ||  |.|...:.:|:.. |..|:.::.|| |:  .:|||
  Rat   647 EK--FYDSHPVAKKITS-LIAEMIALDLQ-PY--SLVDN 679

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15514NP_651739.1 zf-BED 6..47 CDD:427043 9/28 (32%)
zf-BED 120..160 CDD:427043 18/46 (39%)
Zbed4NP_001128272.1 zf-BED 119..167 CDD:427043
zf-BED 289..337 CDD:427043
zf-BED 461..508 CDD:427043 9/28 (32%)
zf-BED 562..609 CDD:427043 18/46 (39%)
Dimer_Tnp_hAT 1087..1163 CDD:399013
Blue background indicates that the domain is not in the aligned region.

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