DRSC/TRiP Functional Genomics Resources

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Protein Alignment neo and CG42326

DIOPT Version :10

Sequence 1:NP_651733.1 Gene:neo / 43523 FlyBaseID:FBgn0039704 Length:744 Species:Drosophila melanogaster
Sequence 2:NP_001286200.1 Gene:CG42326 / 35838 FlyBaseID:FBgn0259226 Length:1376 Species:Drosophila melanogaster


Alignment Length:443 Identity:97/443 - (21%)
Similarity:158/443 - (35%) Gaps:141/443 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 FDLPAASDLSSSLGSEEDSIYYDN----------------APVDCNPEL-VGFEI---VTGYVFS 129
            |.|.|....|:|:.|...|.|.|:                .|.:|:.:. .||.:   ...:.::
  Fly   827 FQLGAPHRESNSVLSYPGSGYEDDYPRRRNDYRQQWTRRAGPDECSAKTSEGFRLHKTAVRHAYN 891

  Fly   130 APEKLMDSQPGTLMLTDCLDTC---RKNKTCQSVNY---ETGL--CVLFSAHADQLPGALTKSQF 186
            .|           .||:|...|   |.:..|.:.:|   :.|.  |:|.....:.|...:.....
  Fly   892 VP-----------TLTECERLCSDPRPSFVCHTFSYRYNQAGRDNCMLCDRPINMLDYYVDIEPD 945

  Fly   187 PVFTIYAQKSCLAV--KPCSR-------AWYVDRVQNYK-----------LKTEVKRTVSVASRR 231
            ..:.||:....:.|  :|..|       :..:...:|.:           .|:.|:.:::|.|..
  Fly   946 RDYDIYSMADDMDVCRQPPPRRHDTAGPSTAISDPRNAQCFFRAIDATRFFKSIVRDSLTVRSVG 1010

  Fly   232 ECFELCLGENDFTCRSANY----DRTSGA---CELS-----ELDR---LTLAGSQAFQVNDGSDY 281
            ||...|:....||||:..:    .|.:|.   |:||     ::|:   |.|  ..||.:.:.:.|
  Fly  1011 ECEMECIRSTKFTCRAFAFRYGQQRHAGVIDNCQLSDWPVRDMDKERHLIL--DAAFDIFERASY 1073

  Fly   282 LENH-C-----VDEPN-KLCEF-KRLPGRIL----KTVDSVYQEVSSIDECRELCLNSPYRCHSY 334
              .| |     |||.: |||.. ...|.|:|    |.|.||..|::...||......:|::|.::
  Fly  1074 --GHGCEIQPIVDEKHKKLCYLGYGSPARLLPPAIKKVISVPSEIACKKECIRFRETTPFKCFAF 1136

  Fly   335 DYNDTGDMVCRLSHHS--RATLADVQEPFL--EVPEASTYELT-----------SCYNVTIECGG 384
            .|.         ||.|  ...|:|:.:..|  :|..|.|.:..           :|.:.....||
  Fly  1137 SYG---------SHASSFNCELSDLDQTELKQDVHYAHTKDRDFWLFAWNPFDWTCRDKVNTIGG 1192

  Fly   385 ---------------GDMLARIRTSKLFNGKVYAKGSP---------KSCSVD 413
                           ||:..|..|   .:||...:.||         .||..|
  Fly  1193 SRVNNDRRMDIFREPGDVAWRHYT---VSGKPCRRSSPCAKNLITGFYSCETD 1242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
neoNP_651733.1 PAN_1 120..197 CDD:459635 15/87 (17%)
PAN_AP_HGF 211..285 CDD:238532 23/99 (23%)
PAN_1 294..373 CDD:459635 23/87 (26%)
ZP 381..615 CDD:214579 13/57 (23%)
CG42326NP_001286200.1 PAN_AP 44..>104 CDD:214680
PHA03247 <224..416 CDD:223021
PAN_AP_HGF 468..560 CDD:238532
PAN_AP_HGF 870..953 CDD:238532 17/93 (18%)
PAN_AP_HGF 984..1070 CDD:238532 21/87 (24%)
Blue background indicates that the domain is not in the aligned region.

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