DRSC/TRiP Functional Genomics Resources

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Protein Alignment neo and tyn

DIOPT Version :10

Sequence 1:NP_651733.1 Gene:neo / 43523 FlyBaseID:FBgn0039704 Length:744 Species:Drosophila melanogaster
Sequence 2:NP_001027032.1 Gene:tyn / 3354987 FlyBaseID:FBgn0284435 Length:715 Species:Drosophila melanogaster


Alignment Length:729 Identity:194/729 - (26%)
Similarity:303/729 - (41%) Gaps:176/729 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 EKLMDSQ-PG-------TLMLTDCLDTCRKNKTCQ-----------SVNYETGLCVLFSAHADQL 177
            |||.|.. ||       .|.|.:|...||:...||           |.:.||. |.|.:..:...
  Fly    41 EKLTDFDFPGNTYYSVKNLSLYECQGWCREEADCQAAAFSFVVNPLSPSQETH-CQLQNDSSAAN 104

  Fly   178 PGALTKSQFPVFTIYAQKSCL-AVKPCSRAWYVDRVQNYKLKTEVKRTVSVASRRECFELCLGEN 241
            |.|..:....::  |..|..| :...|.|.|..:||.|..::......:..:::..|...||.|.
  Fly   105 PSAAPQRSANMY--YMIKLQLRSENVCHRPWSFERVPNKVIRGLDNALIYTSTKEACLSACLNER 167

  Fly   242 DFTCRSANYDRTSGACELSELDRLTLAGSQAFQVND--GSDYLENHCVDEPNKLCEFKRLPGRIL 304
            .|.|||..||..:..|.||:.||  .:..|..|:.|  |:||.||.|: :|.:.|:..|..|...
  Fly   168 RFVCRSVEYDYNNMKCVLSDSDR--RSSGQFVQLVDAQGTDYFENLCL-KPAQACKNNRSFGNSQ 229

  Fly   305 K---TVDSVYQ------------EVSSIDECRELC-LNSPYRCHSY---------DYNDTGDMVC 344
            |   :.:.|.|            :|:|...||..| :.|.:.|.|:         .||      |
  Fly   230 KMGVSEEKVAQYVGLHYYTDKELQVTSESACRLACEIESEFLCRSFLYLGQPQGSQYN------C 288

  Fly   345 RLSHHSRATLADVQEPFLE---------------------------------------------- 363
            ||.|....||.|....:|.                                              
  Fly   289 RLYHLDHKTLPDGPSTYLNHERPLIDHGEPIGQYFENQCEKAAGLGAGSPPGTLDKIDTLPVSLD 353

  Fly   364 -VPEASTYELT----------SCYNVTIECGGGDMLARIRTSKLFNGKVYAKGSPKSCSVDVKSA 417
             :.:.:...||          :||:|::.|....:..::||:|.|||::||.|..::|::||.::
  Fly   354 TIEDPNLTNLTRNDVNCDKTGTCYDVSVHCKDTRIAVQVRTNKPFNGRIYALGRSETCNIDVINS 418

  Fly   418 LDFELRMNYHDLECNVRQSTAGRYVNDIIIQHHDMIVTSSDLGLALACQYDLTNKSVSNGVDLDV 482
            ..|.|.:.....:||. ||..|.|.|.:::|||.:::|.:|....:.|.||:::|:::.|     
  Fly   419 DAFRLDLTMAGQDCNT-QSVTGVYSNTVVLQHHSVVMTKADKIYKVKCTYDMSSKNITFG----- 477

  Fly   483 RGDIMPALSEEVI-----VESPNVIMRITSRDGSDMMRSAEVGDPLALKFEIVDEQSPYEIFIRE 542
               :||....|:|     .|:|...:||......: :.:..:||.|..:.|| .|.:||.||.|.
  Fly   478 ---MMPIRDPEMIHINSSPEAPPPRIRILDTRQRE-VETVRIGDRLNFRIEI-PEDTPYGIFARS 537

  Fly   543 LVAMDGVDNSEITLIDSNGCPTDHFIMGPIYKG-SVSGKMLLSNFDAFKFPSSEVVQFRALVTPC 606
            .|||.....:...:||.:|||||    ..|:.| :..|..|.|.::||:|..|..|.|:..|..|
  Fly   538 CVAMAKDARTSFKIIDDDGCPTD----PTIFPGFTADGNALQSTYEAFRFTESYGVIFQCNVKYC 598

  Fly   607 MPSCEPVQCEQEDTSGEFRSLLSYGRKRRSLNTTDDHPRPRRDIDTSKKSAPSDMLLVQSIQITD 671
            :..|||..||....|.|     |.||:|            ||.|:::...:..||.:.|.|.:.|
  Fly   599 LGPCEPAVCEWNMDSFE-----SLGRRR------------RRSIESNDTKSEDDMNISQEILVLD 646

  Fly   672 KFG------FKQDKQESGDFYDGNETTFTANEEGHGFC---VNAIGLITAATIFLLTQLAVIAIW 727
             ||      ||.|  .|.||  ..:.|.|..|.    |   .:.:.|.....:.:|..::.:   
  Fly   647 -FGDEKREFFKAD--PSTDF--AKDKTVTIIEP----CPTKTSVLALAVTCALMILLYISTL--- 699

  Fly   728 TYCYQRRQKLQPYQ 741
             :||..::.:||::
  Fly   700 -FCYYMKKWMQPHK 712

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
neoNP_651733.1 PAN_1 120..197 CDD:459635 22/83 (27%)
PAN_AP_HGF 211..285 CDD:238532 25/75 (33%)
PAN_1 294..373 CDD:459635 24/150 (16%)
ZP 381..615 CDD:214579 77/239 (32%)
tynNP_001027032.1 PAN_4 46..97 CDD:433846 13/51 (25%)
PAN_AP_HGF 131..210 CDD:238532 26/80 (33%)
PAN_1 236..327 CDD:459635 20/96 (21%)
ZP 382..598 CDD:214579 73/230 (32%)

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