DRSC/TRiP Functional Genomics Resources

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Protein Alignment neo and Matn3

DIOPT Version :10

Sequence 1:NP_651733.1 Gene:neo / 43523 FlyBaseID:FBgn0039704 Length:744 Species:Drosophila melanogaster
Sequence 2:NP_001382499.1 Gene:Matn3 / 313954 RGDID:1305085 Length:481 Species:Rattus norvegicus


Alignment Length:432 Identity:88/432 - (20%)
Similarity:144/432 - (33%) Gaps:154/432 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LALMLYSAATAKEHLRIR--------RQAAESVTAAAPNASKVMASEEIKDK--TEWPGAKETST 66
            :|::.| |:|.|...::.        :||...:|..:......:|.:...::  |...||:..::
  Rat   117 VAVVNY-ASTVKIEFQLNTYSNKQALKQAVARITPLSTGTMSGLAIQTAMEEAFTVEAGARGPTS 180

  Fly    67 EINRTE------RPVENV-----ETRNSGFDLPAA----SDLSS--SLGSE--EDSIYYDNAPVD 112
            .|.:..      ||.:.|     ..|.||.:|.|.    :|:.|  .:.|:  ||.::|..    
  Rat   181 NIPKVAIIVTDGRPQDQVNEVAARARASGIELYAVGVDRADMESLKMMASKPLEDHVFYVE---- 241

  Fly   113 CNPELVGFEIVTGYVFSAPEKLMDSQPGTLMLTDC-LDTCR-KNKTCQSVNYETGLCVLFS---A 172
                          .:...|||    ......|.| ||.|. ....||.|      ||...   .
  Rat   242 --------------TYGVIEKL----SARFQETFCALDQCMLGTHQCQHV------CVSDGDGRH 282

  Fly   173 HADQLPGALTKSQFPVFTIYAQ-KSCLAVKPCSRAWYVDRVQNYKLKTEVKRTVSVASRR----- 231
            |.:...|         :|:.|. |:|.|:..|:            |.|.....:.|..|.     
  Rat   283 HCECSQG---------YTLNADGKTCSAIDKCA------------LNTHGCEQICVNDRNGSYHC 326

  Fly   232 ECFELCLGENDFTCRSANYDRTSGACELSELDRLTLA--GSQAFQVNDGS-----DYLENHCVDE 289
            ||:|      .:|   .|.||.:.|.:    |:..|.  |.|...||||:     :..|.:.::.
  Rat   327 ECYE------GYT---LNADRKTCAAQ----DKCALGTHGCQHICVNDGAGSHHCECFEGYTLNA 378

  Fly   290 PNKLCEFKRLPGRILKTVDSVYQEVS-SIDECRELCLNS---PYRCH---SYDYNDTGDMVCRLS 347
            ..|.|              ||..:.: ....|:.:|::.   .|.|.   .|..||         
  Rat   379 DKKTC--------------SVRDKCALGTHGCQHICVSDGAVSYHCDCFPGYTLND--------- 420

  Fly   348 HHSRATLADVQEPFLEVPEASTYELTSCYNVTIECGGGDMLA 389
              .:.|.:|::            |:.|..::...|..|..||
  Rat   421 --DKKTCSDIE------------EVRSLISIEDACSCGATLA 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
neoNP_651733.1 PAN_1 120..197 CDD:459635 18/82 (22%)
PAN_AP_HGF 211..285 CDD:238532 21/85 (25%)
PAN_1 294..373 CDD:459635 13/85 (15%)
ZP 381..615 CDD:214579 4/9 (44%)
Matn3NP_001382499.1 vWFA 75..298 CDD:469594 44/218 (20%)
FXa_inhibition 305..341 CDD:464251 12/56 (21%)
FXa_inhibition 347..383 CDD:464251 9/35 (26%)
FXa_inhibition 389..425 CDD:464251 7/46 (15%)
Matrilin_ccoil 438..478 CDD:463070 4/11 (36%)

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