DRSC/TRiP Functional Genomics Resources

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Protein Alignment neo and cutl-6

DIOPT Version :10

Sequence 1:NP_651733.1 Gene:neo / 43523 FlyBaseID:FBgn0039704 Length:744 Species:Drosophila melanogaster
Sequence 2:NP_492000.2 Gene:cutl-6 / 189075 WormBaseID:WBGene00012165 Length:374 Species:Caenorhabditis elegans


Alignment Length:380 Identity:86/380 - (22%)
Similarity:150/380 - (39%) Gaps:85/380 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   382 CGGGDMLARIRTSKLFNGKVYAKG--SPKSC--SVDVKSALDFELRMNYHDLECNVR--QSTAGR 440
            |...|:...|.|||.|.|.::.||  ..|||  |........:.|.:.    :|.::  :|...|
 Worm    39 CAENDLALDIVTSKPFRGNIFVKGRAKDKSCRQSYANNGTNSYSLPLG----KCGMQRLRSANPR 99

  Fly   441 YVN---DIIIQHHDM-IVTSSDLGLALACQYDLTNKSVSNGVDLDVRGDIMPA--LSEEVIVESP 499
            .||   .:|:..|.. .:|.:|....:.|.|...::.|:..:|:    .::|.  ||:.:::...
 Worm   100 GVNFMVTVIVSFHPAGFITKNDRAFHVKCFYMEPDEIVTQNIDV----SMIPTTELSDSMVMPKC 160

  Fly   500 NVIMRITSRDGSD--MMRSAEVGDPLALKFEIVDEQSPYE--IFIRELVAMDGVDNSEITLIDSN 560
            ...:|   |||.:  .:..|.|||   :.|. |.|.:|.:  :.:::....|| |..:..::|.:
 Worm   161 EYSVR---RDGPNGPTLTYANVGD---IVFH-VWECTPADMGMLVKKCFVTDG-DGEDHAVVDFD 217

  Fly   561 GCPTDHFIMGPI-YKGSVSGKMLLSNFDAFKFPSSEVVQFRALVTPC---MPSCE---PVQCEQE 618
            ||.||.|::..: |..|:......|  ..||:..|..:.|...:..|   |..|:   |..|   
 Worm   218 GCATDPFLLSELSYDASLMRAHASS--QVFKYADSNQLYFTCQIRLCQKQMGMCQEVTPPNC--- 277

  Fly   619 DTSGEFRSLLSYGRKRRSLNTTDDHPRPRRDIDTSKKS---APSDMLLVQSIQITDKFGFKQDKQ 680
                        |.|:.....:.|..|.:|:.|.|...   |.|::|::             |..
 Worm   278 ------------GVKKLLSEASGDGNRTKREADRSDYEIDVATSELLVL-------------DPA 317

  Fly   681 ESGDFYDGNETTFTANEEGHGFCVNAIGLITAATIFLLTQLAVIAIWTYCYQRRQ 735
            :.|.....            .|||..: |:....:.|:|.:::..:.|....|||
 Worm   318 DRGLLAPS------------PFCVPRL-LLPVLPLILITIVSLTVVSTALVIRRQ 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
neoNP_651733.1 PAN_1 120..197 CDD:459635
PAN_AP_HGF 211..285 CDD:238532
PAN_1 294..373 CDD:459635
ZP 381..615 CDD:214579 63/255 (25%)
cutl-6NP_492000.2 ZP 38..280 CDD:214579 65/273 (24%)
Blue background indicates that the domain is not in the aligned region.

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