DRSC/TRiP Functional Genomics Resources

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Protein Alignment neo and R07A4.4

DIOPT Version :10

Sequence 1:NP_651733.1 Gene:neo / 43523 FlyBaseID:FBgn0039704 Length:744 Species:Drosophila melanogaster
Sequence 2:NP_509797.4 Gene:R07A4.4 / 187644 WormBaseID:WBGene00011075 Length:573 Species:Caenorhabditis elegans


Alignment Length:453 Identity:96/453 - (21%)
Similarity:154/453 - (33%) Gaps:113/453 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LFLALMLYSAATAK---EHLRIRRQAAESVTAAAPNASKVMASEEIKDKTEW------------- 58
            :||..:|..|...|   .|..||....:|:........:...|..::..|:.             
 Worm     6 IFLLFVLVQAQKNKCFVSHKNIRISCGKSIDTRTSITLEECESACVRYNTQCQTIQYDYYRNICE 70

  Fly    59 ----PGA----KETSTEINRTERPVENVE--------TRNSGFDLP---AASDLSSS-LGSE--- 100
                |..    |.||.|:.:.|..:.|.|        |.::...:|   ..|:||.| |.|.   
 Worm    71 IFNVPSPLQMNKTTSEEMQKREIALGNTECAIASLLPTIDTTHLIPNWDCLSELSHSVLNSSQLT 135

  Fly   101 EDSIYYDNAPVDCNPELVG---------------------FEIVTGYVFSAPEKLMDSQPGTLML 144
            :.|...|..||. :|...|                     ||||:..:..|.|...:.:  ..::
 Worm   136 QSSQQLDLKPVK-SPTFTGELATPQRPKPDIKIKKIANEQFEIVSNTIGGAEESRKEQK--VALM 197

  Fly   145 TDCLDTCRKNKTCQSVNYETGLCVLFSAHADQLPGALTKSQFPVFTIYAQKSCLAVKPCSRAWYV 209
            .:.:|...:.:...:                      |...|.|..:.....|    |......|
 Worm   198 AEPIDNINQQQQFDN----------------------TLRNFAVEVLPIVPDC----PLGEHSRV 236

  Fly   210 DRVQNYKLKTEVKRTVSVASRRECFELCL-------GENDFTCRSANYDRTSGACELSELDRLTL 267
            ..::..::..|...|..||...:|.:.|.       ......||||:::|.:..|.:.. |.:..
 Worm   237 QIIEGVEVSREATITFQVAILEQCVQACRVSTYADGSRLPLLCRSAHFNRATRQCSVYS-DAINP 300

  Fly   268 AGSQAFQVNDGSDYLENHCVDEPNKL----CE--FKRLPGRILKTVDSVYQEVSSIDECRELCLN 326
            .|...::.|....|:|..|:  |:.:    |:  |:|:|..||....|....|:|.:||...|:.
 Worm   301 NGYLEYKPNQNVIYIEKICI--PDTVLPMSCDDVFRRIPQHILLGHASEVISVASENECVLECIK 363

  Fly   327 S----PYRCHS-YDYNDTGDMVCRLSHHSRATLADVQEPFLEVPEASTYELTSCYNVTIECGG 384
            :    ...||| ..|.|...:.|.|:.|:|.|......|.|.. :....||.||  ||....|
 Worm   364 AKTLRSVACHSILHYPDFSSLNCILNVHTRHTKNQYFTPELAY-KVDYVELGSC--VTSAASG 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
neoNP_651733.1 PAN_1 120..197 CDD:459635 10/76 (13%)
PAN_AP_HGF 211..285 CDD:238532 17/80 (21%)
PAN_1 294..373 CDD:459635 25/85 (29%)
ZP 381..615 CDD:214579 1/4 (25%)
R07A4.4NP_509797.4 PAN_AP 20..>73 CDD:214680 6/52 (12%)
PAN_1 237..319 CDD:459635 17/82 (21%)
PAN_AP 328..412 CDD:214680 24/84 (29%)

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