DRSC/TRiP Functional Genomics Resources

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Protein Alignment neo and cutl-17

DIOPT Version :10

Sequence 1:NP_651733.1 Gene:neo / 43523 FlyBaseID:FBgn0039704 Length:744 Species:Drosophila melanogaster
Sequence 2:NP_001379101.1 Gene:cutl-17 / 185474 WormBaseID:WBGene00009541 Length:912 Species:Caenorhabditis elegans


Alignment Length:853 Identity:171/853 - (20%)
Similarity:307/853 - (35%) Gaps:265/853 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 SVTAAAPNASKVMASEEIKDKTEWPGAKETSTEINRTERPVENVETRNSGFDLPAASDLSSSLGS 99
            |...:||||:..:.||..:       ..|.||::      :::| |.|.     .|:..|:||.:
 Worm    17 SSRCSAPNATTYLRSEGTR-------LMEFSTKV------MKDV-TLNE-----CANACSNSLST 62

  Fly   100 EED-SIYYDNAPVDCN-----------------PELVGFE----IVTGYVFSAPEKLMDSQPGTL 142
            ||. |..||.:.:.|:                 .:.:.|.    ::...|..||.. .:..|.::
 Worm    63 EECLSFEYDASILQCSHHSDDGQPFGASVLAKASQTISFFQQICLLEEAVCKAPYS-FERYPQSI 126

  Fly   143 M------------LTDCLDTCRKNK-----TCQSV--NYETGLCVLFSAHADQLPGALTKSQFPV 188
            :            |:|||..|..::     .|:|.  .||||.|::...:....|.....:....
 Worm   127 LIGHAMKVLTVDGLSDCLSKCALSQRSYDFLCKSAIYYYETGECIMNRDNKFIYPKLFKTNILDT 191

  Fly   189 FTIYAQKSC--LAVKPCSRAWYVDRVQNYKLKTEVKRTVSVASRRECFELC----LGENDFTCRS 247
            ...|.:.:|  ::.||.....:| |.:.|.:.......|..:..:||.:||    :||.:|.|::
 Worm   192 LVDYFENNCADVSCKPEETLHWV-RTEEYLIDESKDVIVESSDAQECNQLCQNNKIGEENFPCKA 255

  Fly   248 ANYDRTSGACEL-SELDRLTLAGSQAFQ---VNDGSDYLENHCVDEPNKL----CEFKRLPGRIL 304
            ..|..:...|.| :|...:...|.:.|.   :|.| :|.|.:|:  |..|    ..|:.:..|::
 Worm   256 FAYSNSKQECHLTAESSYVGHKGDKRFNLAPLNSG-EYFEKYCL--PTNLQCIEASFELVANRMM 317

  Fly   305 KTVDSVYQEVSSID--ECRELCLNSPYRCHS--YDYNDTGDMVCRLSHHSR------ATLADV-- 357
               .|.|:.:|::.  ||...|:|...||.|  |.|.|....:..:|..||      |...|.  
 Worm   318 ---TSAYKTISALSQHECLSQCMNDGARCSSATYFYMDDECQLSDISQFSRPNEFVVANFTDYFD 379

  Fly   358 -------QEPFLEVPE------------------------ASTYE-------------------- 371
                   .:|.|..||                        |:.:|                    
 Worm   380 KICDPADPKPMLTTPETPPELIQNSVDEEETTSERSIAQGAANFEVATTGTSVEFEDDNLLKDNQ 444

  Fly   372 -------LTSCYNV------------------------------------------------TIE 381
                   :|:..|:                                                :.|
 Worm   445 AVDAVHGVTTTTNIGEKRETKVEIEETVIDDADEFSREIDDSHEESPLTSSEESEGRVKARLSTE 509

  Fly   382 CGGGDMLARIRTSKLFNGKVYAKGSPKSCSVDVKSALDFELRMNY---HDLECNVRQSTAGRYVN 443
            |....:...::.:...:|.:|.|....||.....:....||.:.:   .|.:|...:|...::..
 Worm   510 CRMSGISVSLKFATPTSGTIYIKDHFSSCRQSFSNTSFAELHIPFPTEDDSKCGGIESEPHKWDY 574

  Fly   444 DIIIQHHDM----IVTSSDLGLALACQYD-LTNKSVSNGVDLDVRGDIMPALSEEVIVESPNVIM 503
            :::::.:||    :||:.|....::|.:. :.:|:....:...|.||          |:|..|:|
 Worm   575 NVVVERNDMKTPSLVTTKDKTFQVSCDFSKIADKNQLAALKPKVEGD----------VKSEKVLM 629

  Fly   504 RITSRDGSDMMRSAEVGDPLALKFEIVDEQSPYEIFIRELVAMDGVDNS----EITLIDSNGCPT 564
            .|. |:| ..:.:..:|..::|::.::||......||.|.:| :.|...    |...|...|||.
 Worm   630 EIV-RNG-QAVTTVPLGAEVSLRWTVIDETDKLGFFINECIA-ERVGGQPPYPEPLKIIYQGCPE 691

  Fly   565 D----HFIMGPIYKGSVSGKMLLSNFDAFKFPSSEVVQFRALVTPCMPSCEPVQCEQEDTSGEFR 625
            :    ..:..|:.|   :|::..:....|:|..|..|:.:..:..|:..|.||.|:..    |.|
 Worm   692 EKVRNRLLHDPVVK---NGEVYSTKMKVFRFDGSRRVRIKCSIDVCVEKCPPVICDDL----EIR 749

  Fly   626 SLLSYGRKRRSLNT------------------------TDDHP-----RPRRDIDTSKKSAPSDM 661
            ::.|:|||:|:.|.                        ||:..     :||.:..||..|:....
 Worm   750 NVDSFGRKKRNSNVEKWLKAGNKKETRKRRMVTGTLTITDEEETNTTVKPRPEFSTSSSSSSQQQ 814

  Fly   662 LLVQSIQI 669
            ..||..:|
 Worm   815 YCVQKDRI 822

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
neoNP_651733.1 PAN_1 120..197 CDD:459635 19/99 (19%)
PAN_AP_HGF 211..285 CDD:238532 21/81 (26%)
PAN_1 294..373 CDD:459635 26/148 (18%)
ZP 381..615 CDD:214579 54/249 (22%)
cutl-17NP_001379101.1 PAN_1 27..106 CDD:459635 19/97 (20%)
PAN_AP_HGF 114..199 CDD:238532 17/85 (20%)
PAN_AP 208..295 CDD:214680 21/88 (24%)
PAN_AP_HGF 308..380 CDD:238532 20/74 (27%)
ZP 509..744 CDD:214579 54/250 (22%)

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