DRSC/TRiP Functional Genomics Resources

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Protein Alignment neo and cutl-3

DIOPT Version :10

Sequence 1:NP_651733.1 Gene:neo / 43523 FlyBaseID:FBgn0039704 Length:744 Species:Drosophila melanogaster
Sequence 2:NP_510492.2 Gene:cutl-3 / 184721 WormBaseID:WBGene00008978 Length:405 Species:Caenorhabditis elegans


Alignment Length:421 Identity:87/421 - (20%)
Similarity:152/421 - (36%) Gaps:108/421 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   380 IECGGGDMLARIRTSKLFNGKVYAKG--SPKSCSVDVKSALDFELRMNYHDLECNV-RQSTAG-- 439
            |.||...:....:|...|.|.||.||  |.|.|..|........|.::|.  .|:| ||.::.  
 Worm    32 IRCGSESLSINFKTQGAFEGHVYVKGHYSMKHCRTDATLESQVNLTVSYS--ACDVIRQRSSNPK 94

  Fly   440 --RYVNDIIIQHHDMIVTSSDLGLALACQYDLTNKSVSNGVDLDV-------------------- 482
              .....|||..|.|.:|..|....:.|.|....|:|:..:::|:                    
 Worm    95 GIMMTATIIISFHPMFITKIDKSYKVQCFYAEAQKTVTQQLNVDIAKEQEKKIFVMVGDEEGGTV 159

  Fly   483 ---RGDIM-------PALSEEVI--VESPNVIMRITSRDGSDMMRSAEVGDPLALKFEIV----- 530
               .||..       |:..|.:.  |..|:...|:.:...::.:..|.||       :||     
 Worm   160 SHTTGDQKKLHKLNDPSTEERISYNVPLPDCKYRVLTESKTEEVAFATVG-------QIVYHEWS 217

  Fly   531 ------DEQSPYEIFIRELVAMDGVDNSEITLIDSNGCPTDHFIMGPI-YKGSVSGKMLLSNFDA 588
                  ::.||:.:.:......|.. ..|:.:.|.|||..|.:::..: |...::|..|   ...
 Worm   218 CEAPGQNQTSPFCVTVHSCNVKDET-GKEVQIFDENGCAVDKYLINNLEYSSDLTGGQL---SQV 278

  Fly   589 FKFPSSEVVQFRALVTPCMPSCEPVQCEQEDTSGEFRSLLSYGRKRRSLNTTDDHPRPRRDIDTS 653
            |||.....|.|:..:.        :..::||.|              .:.::|..|...|    .
 Worm   279 FKFADQPSVFFQCKIR--------LGLKEEDGS--------------CIRSSDHCPATLR----G 317

  Fly   654 KKS---APSDM-LLVQSIQITDKFGFKQDKQESGDFYDGNETTFTANEEGHGFCVN---AIGLIT 711
            |:|   ..:|. ::.|::.|.|      ..:.|......:|..|:........||:   |.|::.
 Worm   318 KRSTTLGDNDFDVISQTMTILD------IDEPSKSHKKSSELQFSKLFVTSDVCVSPTIASGIVV 376

  Fly   712 AATIFLLTQLAVIAIWTYCYQR---RQKLQP 739
            ..:..||  :.:|:.:..|::.   :.||.|
 Worm   377 FVSSLLL--VCLISSFLLCFRHQTVKVKLAP 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
neoNP_651733.1 PAN_1 120..197 CDD:459635
PAN_AP_HGF 211..285 CDD:238532
PAN_1 294..373 CDD:459635
ZP 381..615 CDD:214579 60/284 (21%)
cutl-3NP_510492.2 ZP 33..306 CDD:214579 63/307 (21%)
Blue background indicates that the domain is not in the aligned region.

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