DRSC/TRiP Functional Genomics Resources

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Protein Alignment neo and cutl-5

DIOPT Version :10

Sequence 1:NP_651733.1 Gene:neo / 43523 FlyBaseID:FBgn0039704 Length:744 Species:Drosophila melanogaster
Sequence 2:NP_495472.1 Gene:cutl-5 / 184302 WormBaseID:WBGene00017351 Length:437 Species:Caenorhabditis elegans


Alignment Length:439 Identity:97/439 - (22%)
Similarity:147/439 - (33%) Gaps:153/439 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   382 CGGGDMLARIRTSKLFNGKVYAKGSPKSCSVDVKSALDFELRMNYHDLECNVRQSTAGRYVND-- 444
            |....::.:|:||......:|..|                 |.|  |:||..|........:|  
 Worm    33 CEEDKIIIKIKTSMSNPSNIYVDG-----------------REN--DMECVSRNQNKIEVAHDKC 78

  Fly   445 ------------------IIIQHHDMIVTSSDLGLALACQYDLTNKSVSNGVDLDVRGDIMPALS 491
                              |.:|.|.:.||.||......|.|          .|..|..||...|.
 Worm    79 GVVNEKTEQPNGSIRRLCIFVQLHPLFVTESDRSYCAQCVY----------ADSHVMKDIESTLD 133

  Fly   492 EEVIVESP----------------NVIMRITSRDGSDMMRSAEVGDPLALKFEIVDEQSPYE-IF 539
               |.|:|                |..:|...:||.. ::.|.:||.:   |.:......:. |.
 Worm   134 ---ISEAPPLQLSPQFDAPVMPKCNYSIRKQGKDGPP-VQYASIGDSV---FHVWSCDGNHNGIL 191

  Fly   540 IRELVAMDGVDNSEITLIDSNGCPTDHFIMG-PIYKGSVSGKMLLSNFDAFKFPSSEVVQFRALV 603
            ::.....||..| :|.:||.|||..||::|. |||.|..|  :.......|||....|.:|...:
 Worm   192 VQNCHVEDGQGN-KILIIDQNGCGIDHYVMDTPIYNGEQS--IAFQETHVFKFAQRTVTRFICQI 253

  Fly   604 TPCM--------------PSCE-------------------PVQCEQE------DTSGEF----- 624
            ..||              ||.|                   |.....:      |||.||     
 Worm   254 KICMKGDDCKRLSPPEACPSLEERFNEDPDKGKVFADEIHPPASMPSDLTGPNGDTSVEFVRRAP 318

  Fly   625 -RSLLSYG------RKRRS--LNTTDDHPRPRRDIDTSKKSAPSDMLLVQSIQITDKFGFKQDKQ 680
             :..:.||      |.||.  :||.     ||.......|:...:|.:|..:::   |...||. 
 Worm   319 AKGSIYYGVGYNPKRHRREILINTA-----PRSPKQFVMKNGYPEMEMVGELRV---FENPQDV- 374

  Fly   681 ESGDFYDGNETTFTANEEGHGFCVNAIGLITAATIF---LLTQLAVIAI 726
               ::|:...::.:|..   ..|.:     .::|:|   |:|.|.|::|
 Worm   375 ---EYYESQRSSASATS---SVCES-----QSSTLFFCLLVTALVVLSI 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
neoNP_651733.1 PAN_1 120..197 CDD:459635
PAN_AP_HGF 211..285 CDD:238532
PAN_1 294..373 CDD:459635
ZP 381..615 CDD:214579 67/303 (22%)
cutl-5NP_495472.1 ZP 32..274 CDD:214579 64/279 (23%)
Blue background indicates that the domain is not in the aligned region.

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