DRSC/TRiP Functional Genomics Resources

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Protein Alignment neo and cutl-9

DIOPT Version :10

Sequence 1:NP_651733.1 Gene:neo / 43523 FlyBaseID:FBgn0039704 Length:744 Species:Drosophila melanogaster
Sequence 2:NP_496293.2 Gene:cutl-9 / 174640 WormBaseID:WBGene00010893 Length:562 Species:Caenorhabditis elegans


Alignment Length:708 Identity:144/708 - (20%)
Similarity:232/708 - (32%) Gaps:253/708 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 GSEEDSIYYDNA----P-VDCNPELVGFEIVTGYVFSAPEKLMDSQPGTLMLTDCLDTCRKNKTC 157
            |:.:.:..:|||    | :.|..:.:..|::|..:|:....:    .|......|..|.| |...
 Worm    23 GAGKSASAFDNAIIGQPYISCQRDRIVIEVITERLFTGKVFV----KGDYANPQCTKTFR-NGVA 82

  Fly   158 QS---VNYETGLCVLFSAHADQLPGALTKSQFPVFTIYAQKSCLAVKPCSRAWYVDRVQNYKLKT 219
            .|   :..||.|            |.:|||:.|    |.:....|.:..|.:...::.||.|..:
 Worm    83 SSGGHIEDETFL------------GTVTKSREP----YVEDHLKASRGSSDSKISNQYQNQKATS 131

  Fly   220 EV------KRTVSVASRRECFELCLGENDFTCRSANYDRTSGACELSELDRLTLAGSQAFQVNDG 278
            ..      |....:.::.:.|.    |||                                :|..
 Worm   132 NTNFEHASKSGTDLGTKSKTFH----END--------------------------------INSA 160

  Fly   279 SDYLENHCVDEPNKLC------EFKRLPG-----------------RIL-KTVDS---------- 309
            .|..|...:...|:..      |:|.:.|                 |:. |:|.|          
 Worm   161 PDIAETFLLPRKNETTSDTDEGEWKGIGGASAGGNAIFGGTRGEELRVFGKSVTSSSTRSRPGST 225

  Fly   310 VYQEVSSIDECRELCLNSPYRCHSYDYNDTGDMVCRLSHHSRATLADVQEPFLEVPEASTYELTS 374
            :....||..:|..|...:|..|                 ..|.|........||||      |.|
 Worm   226 LPLSTSSSPDCPPLTTCAPCAC-----------------EERRTRRATNSIRLEVP------LNS 267

  Fly   375 CYNVTIECGGGDMLARIRTSKLFNGKVYAKGSPKSCSVDVKSALDFELRMNYHDLECNVRQSTAG 439
            |                      |.|...|.:|.|..|.:.:.:.|                   
 Worm   268 C----------------------NTKRDRKLNPPSVVVSLIAVVSF------------------- 291

  Fly   440 RYVNDIIIQHHDMIVTSSDLGLALACQYDLTNKSVSNGVDLDVRGDIMPALSEEV--IVESPNVI 502
                      ||..:|..|....:.|.|....|:||..:|:::..:      :|:  .||.|:..
 Worm   292 ----------HDSFITKLDKAYHIQCAYAEAEKTVSTDLDVNMTDE------QEINGTVEPPSCD 340

  Fly   503 MRITSRDGSDMMRSAEVGDPLALKFEIVDEQ--------SPYEIFIRELVAMDGVDNSEITLIDS 559
            ..|:.::|:.:..|. ||       |:|..|        :..::.:.:....||. ..:..:||.
 Worm   341 YLISDQNGNSVQNSL-VG-------ELVRHQWVCKGGLTNKLKMLVHQCYVKDGA-GQQFEVIDQ 396

  Fly   560 NGCPTDHFIM-GPIYKGSVSGKMLLSNFDA--FKFPSSEVVQFRALVTPCMPSCEPVQC--EQED 619
            :||..|..:: .|.|  |..|  :.:..||  ||||....|.||..:|.|  |.:..:|  ....
 Worm   397 HGCTLDQLMLQTPTY--SEDG--MSAQVDAYIFKFPDRSTVDFRCTITFC--SVDDAECLDMTPP 455

  Fly   620 TSGEFRSLLSYGRKRRS---LNTTDDHPRPRR--DIDTSKKSA----PSDMLLVQSIQITDKFGF 675
            ..|...:||.  ||:||   |::...|.....  |||:||...    |:..||.::         
 Worm   456 KCGANNNLLR--RKKRSSHGLSSMSLHANSLTVFDIDSSKTDTNQLLPTPALLRKT--------- 509

  Fly   676 KQDKQESGDFYDGNETTFTANEEGHGFCVNAIGLITAATIFLLTQLAVIAIWTYCYQR 733
                      ::..|.||..:....|.      ||:|:|.|....:||  |::|.:.|
 Worm   510 ----------FEEYERTFCVSVASFGI------LISASTFFATISIAV--IFSYFFLR 549

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
neoNP_651733.1 PAN_1 120..197 CDD:459635 18/79 (23%)
PAN_AP_HGF 211..285 CDD:238532 11/79 (14%)
PAN_1 294..373 CDD:459635 19/112 (17%)
ZP 381..615 CDD:214579 52/246 (21%)
cutl-9NP_496293.2 ZP 244..460 CDD:214579 65/310 (21%)

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