DRSC/TRiP Functional Genomics Resources

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Protein Alignment neo and cutl-2

DIOPT Version :10

Sequence 1:NP_651733.1 Gene:neo / 43523 FlyBaseID:FBgn0039704 Length:744 Species:Drosophila melanogaster
Sequence 2:NP_496097.1 Gene:cutl-2 / 174532 WormBaseID:WBGene00013145 Length:382 Species:Caenorhabditis elegans


Alignment Length:291 Identity:70/291 - (24%)
Similarity:121/291 - (41%) Gaps:40/291 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   380 IECGGGDMLARIRTSKLFNGKVYAKGS--PKSCSVDVKSALDFELRMNYHDLEC---NVRQSTAG 439
            |.|....:...:.|...|.|.::.:||  .|||..:..:.....:...:...:|   ..||..|.
 Worm    27 IRCAPTGITIMLETDSPFKGALFLRGSADKKSCKANFSAQPSQNISFEFGFDDCPSRRKRQIVAP 91

  Fly   440 RYV---NDIIIQHHDMIVTSSDLGLALACQYDLTNKSVSNGVDLD-----VRGD--IMPALSEEV 494
            |.:   :.:::.:|..|:|..|:...:.|.|...|..|...:.::     :..|  .:|.....|
 Worm    92 RGMTMSSVLVVSYHGSIITHRDVAYQIDCFYREENSRVETMLSVNAPQPRILSDEPKLPTCDYRV 156

  Fly   495 IVESPNVIMR--ITSRDGSDMMRSAEVGDPLALKFEIVDEQSPYEIF---IRELVAMDGVDNSEI 554
            .|.....:..  :||.......:.|.|||.: :........:|.:::   :....|.|| .:..:
 Worm   157 EVTGGKAVAGGIVTSSLSETASQIANVGDSV-IHIWTCSGDAPSDVYCIQVYSCTAEDG-GSDTV 219

  Fly   555 TLIDSNGCPTDHFIMGPI-YKGSVSGKM-LLSNFDAFKFPSSEVVQFRA--LVTPCMPSCE-PV- 613
            .::|.|||.||..::.|| ||   .|.| ..::..||||..:.:|.|:.  .:|...||.| || 
 Worm   220 QVVDENGCTTDGELLSPIKYK---EGSMRAAASSHAFKFVDNHIVYFKCNIRITVKNPSGECPVN 281

  Fly   614 QCEQEDTSGEFRSLLSYGRKRRSLNTTDDHP 644
            .|....::|    |:|  ||.|.:   .:||
 Worm   282 NCSPNGSTG----LIS--RKARDV---FEHP 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
neoNP_651733.1 PAN_1 120..197 CDD:459635
PAN_AP_HGF 211..285 CDD:238532
PAN_1 294..373 CDD:459635
ZP 381..615 CDD:214579 60/259 (23%)
cutl-2NP_496097.1 ZP 28..286 CDD:214579 61/262 (23%)
Blue background indicates that the domain is not in the aligned region.

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