DRSC/TRiP Functional Genomics Resources

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Protein Alignment neo and cutl-15

DIOPT Version :10

Sequence 1:NP_651733.1 Gene:neo / 43523 FlyBaseID:FBgn0039704 Length:744 Species:Drosophila melanogaster
Sequence 2:NP_495904.2 Gene:cutl-15 / 174426 WormBaseID:WBGene00011888 Length:385 Species:Caenorhabditis elegans


Alignment Length:389 Identity:81/389 - (20%)
Similarity:143/389 - (36%) Gaps:75/389 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   379 TIECGGGDMLARIRTSKLFNGKVYAKGSP-KSCSVDVKSALDFELRMNYHDLECNVRQSTAGRYV 442
            |:.|....:..::||...|.|.|..|.|| |:|...:.:....|:.:.:.  ||.|.:..:....
 Worm    38 TVSCAADAIYVKLRTKSTFLGHVDVKYSPDKACFQSLVTNNQIEILIPHE--ECMVPRRRSLHPT 100

  Fly   443 NDII-----IQHHDMIVTSSDLGLALAC--QYDLTNKSVSNGV------DLDVRGDIMPALSEEV 494
            ..|:     :..|....|..|....:.|  |..:...|.|..:      ..|.:|   |:.|.||
 Worm   101 GVILEVSLSVSFHPEFTTVDDRIFNMQCFHQKKINGTSTSLAIGSPKPPPSDTKG---PSCSYEV 162

  Fly   495 IVESPNVIMRITSRDGSDMMRSAEVGDPLALKFEIVDEQSPYE--IFIRELVAMDGVDNSEITLI 557
            :. ||..:.......|.|:..|.:.             |:.||  |.|.....:.|.:..|:  |
 Worm   163 LT-SPGGLPAGRLALGQDVYHSWQC-------------QNVYESCIMIENCELVGGEETHEV--I 211

  Fly   558 DSNGCPTDHFIMGPI-YKGSVSGKMLLSNFDAFKFPSSEVVQFRALVT--------PC-MPSCEP 612
            ||:||.....||..: |.....   :.::...|....:.:|.|...|.        .| .|.|:.
 Worm   212 DSSGCSKHESIMPQLEYHNRTH---VGTSVKVFGVSHTSIVYFACQVRLHPQLPTGECPKPKCDL 273

  Fly   613 VQCEQEDTSGEFRSLLSYGRK---RRSLNTTDDHPRPRRDIDTSKKSAPSDMLLVQSIQITDKFG 674
            ::.::||:| :|.|:....:.   .:.:|.|.....|.......:.:.|...:..:||:...:..
 Worm   274 MRRKREDSS-QFPSIDVRSQNLEISQLINITSSTMTPHPTEPPIQHTCPDIHVETESIEEASESK 337

  Fly   675 FKQDKQESGDFYDGNETTFTANEEGHGFCVNAIGLITAATIFLLTQLAVIAIWTYCYQRRQKLQ 738
            ...:::...||              ....|.:| |:|.|.|.:.|.:.::.:      ||||.:
 Worm   338 ALDEERICADF--------------RSVLVVSI-LLTVALILITTTIVILIV------RRQKYE 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
neoNP_651733.1 PAN_1 120..197 CDD:459635
PAN_AP_HGF 211..285 CDD:238532
PAN_1 294..373 CDD:459635
ZP 381..615 CDD:214579 56/259 (22%)
cutl-15NP_495904.2 ZP 41..272 CDD:214579 55/254 (22%)
Blue background indicates that the domain is not in the aligned region.

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