DRSC/TRiP Functional Genomics Resources

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Protein Alignment neo and LOC1270352

DIOPT Version :10

Sequence 1:NP_651733.1 Gene:neo / 43523 FlyBaseID:FBgn0039704 Length:744 Species:Drosophila melanogaster
Sequence 2:XP_309038.3 Gene:LOC1270352 / 1270352 VectorBaseID:AGAMI1_012759 Length:561 Species:Anopheles gambiae


Alignment Length:334 Identity:73/334 - (21%)
Similarity:123/334 - (36%) Gaps:63/334 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   373 TSCYNVTIECGGGDMLARIRTSKLFNGKVYAKG---SPKSCSVD--VKSALDFELRMNYHDLECN 432
            |...::..||....|..||..:..|||.:|:.|   .|....::  .:...:|.:::|       
Mosquito   190 TRVQHIEAECQDDYMKIRIGFNGSFNGLLYSSGYAYDPDCMYINGSGRDYYEFFIQLN------- 247

  Fly   433 VRQSTAGRYV---------------NDIIIQHHDMIVTSSDLGLALACQ--YDLTNKSVSNGVDL 480
             |..|.|:..               |.:.:|::.:|....|....:.|:  ||.........:|:
Mosquito   248 -RCGTLGKNAIGEDSRKNPTKNFMWNTVTVQYNPLIEEEFDEHFKVTCEYGYDFWKTVTFPFLDV 311

  Fly   481 DVRGDIMPALSEEVI--VESPNVIMRITSRDGSDMMR---SAEVGDPLALKFEIVDEQSPYEIFI 540
            :|      |....|:  :..|...|.|.:..|::..|   ...|||||.|...:..:...::|.:
Mosquito   312 EV------ATGNPVVFTLSPPECYMEIRNGYGTNGARVTGPVRVGDPLTLIIYMRSKYDGFDIVV 370

  Fly   541 RELVAMDGVDNSEITLIDSNGCPTDHFIMGPIYKGS-----VSGKMLLSNFDAFKFPSSEVVQFR 600
            .:..|.:|. |..|.|||..|||.|..::.. ::||     |....:.:....|:|..|..:...
Mosquito   371 NDCFAHNGA-NKRIQLIDEYGCPVDDKLISR-FRGSWSDTGVFETQVYAYMKTFRFTGSPALYIE 433

  Fly   601 ALVTPCMPSCEPVQCEQEDTSG-------------EFRSLLSYGRKRRSLNTTDDHPRPRRDIDT 652
            ..|..|...|....|...:..|             .....:|..:..|.|...|:..|.:::..|
Mosquito   434 CDVRMCHGRCPSQPCHWRNLKGVTKREAVQPQVNTTLSDNISLFQALRVLQEEDEEARAKKESIT 498

  Fly   653 SKKSAPSDM 661
            |.|  |.||
Mosquito   499 SAK--PQDM 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
neoNP_651733.1 PAN_1 120..197 CDD:459635
PAN_AP_HGF 211..285 CDD:238532
PAN_1 294..373 CDD:459635 73/334 (22%)
ZP 381..615 CDD:214579 59/265 (22%)
LOC1270352XP_309038.3 None
Blue background indicates that the domain is not in the aligned region.

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