Protein Alignment Usp1 and DUBAI

DIOPT Version :9

• Sequence 1: NP_001263061.1
• Gene: Usp1 / 43462
• FlyBaseID: FBgn0028476
• Length: 1078
• Species: Drosophila melanogaster
• Sequence 2: NP_610784.1
• Gene: DUBAI / 36361
• FlyBaseID: FBgn0033738
• Length: 852
• Species: Drosophila melanogaster
• Alignment Length: 707
• Identity: 126/707 - (17%)
• Similarity: 218/707 - (30%)
• Gaps: 282/707 - (39%)

  Fly   284 QYYGPNGGSNAAGAGAGLNGSAAALNHAPSMGTLCNIGNSCYLNSVVYTLRFAPHFLHNLHHLIQ 348
            |.|.|:  .|.......::.:|.......:...|.|:||:||:|||:..|.....|...:  |:.
  Fly   329 QTYEPS--PNCVALAKAMHENAQPWGRRNARVGLVNLGNTCYMNSVLQALAMTSDFSRQI--LLI 389

  Fly   349 DLNVVQQTIVRQQTARSASLGKNVSAAQLEHARSWSSKDLATSTDQYSGQNGGVNSGNGGSGSSK 413
            :.|.|....|:||.|             |.|
  Fly   390 ECNSVLLMKVQQQIA-------------LMH---------------------------------- 407

  Fly   414 STHQSVTEKLHELYNNLHGNEMADSTEPYHADTLLHAIQDVNATFEGNQQQDAHEFLMCVLNCI- 477
                      |.|...|..:.:.::|.|              .:|....|||:.|||..:|:.:
  Fly   408 ----------HSLRYELTPSRVLNATRP--------------PSFTPGLQQDSSEFLGYLLDLLH 448

  Fly   478 -RETNQSLI-----------KAIGECP-----EVIANG---YIANPDEVDTGEGQDRTDSTASQN 522
             .|.|.|.:           :.:.:.|     :::::|   |.:...|:.:|...|
  Fly   449 EHEINSSSVTGHSVGPPKTGREVDDVPALLSEDILSSGVIPYNSKDHELSSGSNSD--------- 504

  Fly   523 LNAGNGSLATSQTTTTK-TSFFSRKSKRKDEVKPSKSTRVQSPLKENSPTAGGITGAGTAHATAN 586
             |..:....|...|.|| |:...::.::.|:.||.
  Fly   505 -NCNHKPTPTPPATPTKATNGLKQQGQQVDQAKPP------------------------------ 538

  Fly   587 SLFYLNTVDLSGASSTSGSASTSASGVVSTSAALPTPPQATKYSSDDEMNSATVLKDKMRLEERI 651
                 :|:|
  Fly   539 -----STID-------------------------------------------------------- 542

  Fly   652 RELNLNFFSSDFEGIVVLTTKCLSCETITRQKQGMLDISVPVPIS----GYDNADLQDKPSTYIQ 712
                     ..|.|.:..|.:||:|...:|.:....::.:..|..    |..|..:||    .|:
  Fly   543 ---------KTFAGKLSTTYRCLNCGWESRNEDSFRELQLSFPDDKEDCGATNYSVQD----LIE 594

  Fly   713 NSCITKEYFRGENKYSCNQCTGYTEAIRSISYEVLPRLLVIQLNRFSGG---------MEKVSTY 768
            ..| :.|...|:|:|.|.||....:|.|.|.....|:.|::.|.:|...         |.||...
  Fly   595 YYC-SPEKLDGDNQYFCPQCKKLCDAERHIGVTQAPKNLILTLKQFKYDQKYHFRTKLMHKVFHD 658

  Fly   769 VPTTFTLPCFCATCCELGEGNKLHVYKLYSVITHVGATLTVGHYIAYTCFLDLASDYVNCPKDRR 833
            ...|..:    :....|.|.:.:| |.||:.:.|.|.::..|||..:.     |....|..|...
  Fly   659 ESVTVKM----SAKDSLQEMSTVH-YDLYAGVVHAGYSMDSGHYFTFA-----ADQAKNWYKFND 713

  Fly   834 NTMTNSQ-----TMASQAVP----------SNENAAPNNGSSSVASTPVIAAASALAS------- 876
            |.:|:|:     .:.|...|          |||:   |:.::|.:|:.|..:...:.|
  Fly   714 NVVTHSKPEEMHNLTSPNTPYILFYKMCGHSNES---NSVTASCSSSMVSGSNDQVVSVPLSPPL 775

  Fly   877 ---------------SGNILMKKMKFGRSKASSSGDMSKNVKQVNGIISKNITNGIG 918
                           ..::..:::|..|.|..:||       ..|..:|::..:|.|
  Fly   776 KLEELPRRLRDYVRKDNHVYNEELKMQRFKRGNSG-------HGNAFVSRHNFDGDG 825

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Usp1	NP_001263061.1	Peptidase_C19	308..819	CDD:271592	96/545 (18%)
DUBAI	NP_610784.1	UCH	358..738	CDD:278850	104/577 (18%)
		Peptidase_C19H	359..739	CDD:239129	104/577 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45456832
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1864
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR24006
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.930