Protein Alignment: Usp1 and Usp30

• Sequence 1: NP_001263061.1
• Gene: Usp1
• FlyBaseID: FBgn0028476
• Length: 1078
• Species: Drosophila melanogaster
• Sequence 2: NP_001284912.1
• Gene: Usp30
• FlyBaseID: FBgn0029819
• Length: 558
• Species: Drosophila melanogaster
• Alignment Length: 639
• Identity: 117/640 (18%)
• Similarity: 197/640 (31%)
• Gaps: 227/640 (35%)

  Fly   285 YYGPNGG--SNAAGAGAGLNGSAAALNHAPSMGTLCNIGNSCYLNSVVYTLRFAPHFLHNLHHLI 347
            ::||:|.  ....|..|||:                |.|.:|:||:::..:...|.|:
  Fly    23 FWGPSGSRLRQRRGQIAGLH----------------NFGLTCFLNTLLQAMAACPQFI------- 64

  Fly   348 QDLNVVQQTIVRQQTARSASLGKNVSAAQLEHARSWSSKDLATSTDQYSGQNGGVNSGNGGSGSS 412
                                              :|                  :...|..|...
  Fly    65 ----------------------------------AW------------------LQLYNNASPDR 77

  Fly   413 KSTHQSVTEKLHELYNNLHGNEMADSTEPYHADTLLHAIQDVNATFEGNQQQDAHEFLMCVLNCI 477
            ||...|:...| |:.|..|.....|   ||....:|.|:..:..... .::.||||....:|.|:
  Fly    78 KSLITSMLNTL-EVVNGTHATLRGD---PYSPGAVLRALNALGWVIP-QEEHDAHELFHVLLTCL 137

  Fly   478 RETNQSLIKAIGECPEVIANGYIANPDEVD---------TGEGQDRTDSTASQNLNAGN--GSLA 531
            .|      :||.  |:.:.....|.|.:.|         |..|..|:.|:.:..|.|..  |...
  Fly   138 EE------EAIR--PQPLGCLSDALPTDNDDNSSLAGTATPVGGFRSFSSMAAGLGASQRIGDQP 194

  Fly   532 TSQTTTTKTSFFSRKSKRKDEVKPSKSTRVQSPLKENSPTAGGITGAGTAHATANSLFYLNTVDL 596
            ...::...|.|.:        ::..:||.:|..::..:.|..  :.|.......|.  .|.:|.|
  Fly   195 NRPSSAMLTDFLN--------MEYDESTSLQRLVRSEAHTPD--SPASVCERDGND--RLGSVLL 247

  Fly   597 SGASSTSGSASTSASGVVSTSAALPTPPQATKYSSDDEMNSATVLKDKMRLEERIRELNLNFFSS 661
            ...|    ..:.....:||...:|.||....:.||...:..:...:|: .|..|:..
  Fly   248 DAVS----PGTPFGFPLVSNPDSLATPMLGGERSSRPRLPQSQQQQDE-GLNRRVSS-------- 299

  Fly   662 DFEGIVVLTTKCLSCETITRQKQG---------MLDISVPVPISG------------------YD 699
                         ||.::.|..:|         |:...|..|..|                  ||
  Fly   300 -------------SCRSLERLHRGPGRVSIWSNMMPSQVAHPFQGAMGAQIVCNGCGSKSAVRYD 351

  Fly   700 NAD-----LQDKPSTYIQNSCITKEYFRGE--NKYSCNQCTGYTEAIRSISYEVLPRLLVIQLNR 757
            ..|     |..:..|.:....:..||...|  :...|:.|...|...:|:::..||..|.|.:.|
  Fly   352 KFDSITLNLPPQRRTGLSLGHLLSEYITSEDLSDVKCDSCNETTTHTKSVTFAKLPACLCIHVAR 416

  Fly   758 F----SGGMEKVSTYV---------PTTFTLP--------------CFCATCCEL------GEG- 788
            .    :|.:.|...||         |.:|..|              ...::...:      |||
  Fly   417 TVWLPTGQVCKRKDYVHFPESLSMAPYSFVQPHLNSQAGTPWGSTMSLYSSSLPMNNGVGGGEGF 481

  Fly   789 ---NKLHVYKLYSVITHVGATLTVGHYIAYTCFLDLASDYVNCPKDRRNTMTNS 839
               ...::|:|.:|:.|.|.. ..||::.|                ||.::.|:
  Fly   482 GTMFPKNLYRLLAVVVHSGEA-NSGHFVTY----------------RRGSLRNA 518

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Usp1	NP_001263061.1	Peptidase_C19	308..819	CDD:271592	107/593 (18%)
Usp30	NP_001284912.1	Peptidase_C19	39..>139	CDD:271592	31/180 (17%)
		UCH	<304..547	CDD:278850	44/233 (19%)
		Peptidase_C19F	<323..548	CDD:239127	41/214 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930				C127927375
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100			P	PTHR24006
RoundUp	0	0.000	Not matched by this tool.
	2	2.030