Protein Alignment: Usp1 and Usp1

• Sequence 1: NP_001263061.1
• Gene: Usp1
• FlyBaseID: FBgn0028476
• Length: 1078
• Species: Drosophila melanogaster
• Sequence 2: NP_001015015.1
• Gene: Usp1
• RGDID: 1306461
• Length: 784
• Species: Rattus norvegicus
• Alignment Length: 902
• Identity: 199/903 (22%)
• Similarity: 340/903 (38%)
• Gaps: 224/903 (25%)

  Fly   229 ARSSRKRTNTMSL--YDRR-------FQTTTEERRVANGYGGNAARSVTGSSSNEIESQEPQSHQ 284
            :|.|..:.|.:||  :.::       |..:.|:...|:.|.|:....|..::.:...|.|.:.
  Rat    13 SRGSPSKKNRLSLKFFQKKETKRALDFTDSQEDEEKASEYRGSEIDQVVPAAQSSPVSCEKRE-- 75

  Fly   285 YYGPNGGSNAAGAGAGLNGSAAALNHAPSMGTLCNIGNSCYLNSVVYTLRFAPHFLHNLHHLIQD 349
                                    |..|.:| |.|:||:|||||::..|.|.|.|...:.||
  Rat    76 ------------------------NLLPFVG-LNNLGNTCYLNSILQVLYFCPGFKAGVKHL--- 112

  Fly   350 LNVVQQTIVRQQTARSASLGKNVSAAQLEHARSW----SSKDLATSTDQYSGQNGGVNSGNGGSG 410
            .|::.:   :::..:..|:.|:..:.:.:...|:    |.:.|..|.:|.             ..
  Rat   113 FNIISR---KKEALKDDSIQKDKGSCKEDPLASYELICSLQSLIISVEQL-------------QA 161

  Fly   411 SSKSTHQSVTEKLHELYNNLHGNEMADSTEPYHADTLLHAIQDVNATFEGNQQQDAHEFLMCVLN 475
            |.....:..|::|              :|:|..   ||:.::::|..:||..|.||.|.|.|:|.
  Rat   162 SFLLNPEKYTDEL--------------ATQPRR---LLNTLRELNPMYEGYLQHDAQEVLQCILG 209

  Fly   476 CIRETNQSL----IKAIGECPEVIANGYIANPDEVDTGEGQDRTDSTAS-----QNLNAGN---- 527
            .|:||.|.|    ||.:.|....:....:..  |...|.....||||.:     :.|..||
  Rat   210 NIQETCQLLKKEEIKNLTEFSSKVEEKSLQK--EETGGISSTETDSTRNLDDLKEQLPKGNWKRK 272

  Fly   528 -----GSL-------------------------ATSQTTTTKTSFFSRKSKRKDEVKPS-KSTRV 561
                 |::                         ||..|.........:.....:..||| |.::|
  Rat   273 SDGESGNMKKKVKLSRESQPLEENQRQTRSKRKATGDTLEASPKIIPKCVSENESAKPSQKKSKV 337

  Fly   562 Q----SPLKENSPTAGGITGAG--TAHATANSLFYLNTVDLSGASSTSGSAST-SASGVVSTSAA 619
            :    .|..:...........|  |.:..:.....:|..||.......|..:| :.||..|..::
  Rat   338 KINWLKPATKQPSILSKFCSLGKITTNQRSKGQPKVNEGDLEEDLEKDGRDNTVNGSGPASPGSS 402

  Fly   620 LPTPPQATKYSSDDEMNSATVLKDKMRLEERIRELNLNFFSSDFEGIVVLTTKCLSCETITRQKQ 684
            : ||..:::..|               :.:...::........|:|.:||.|:||.||::|.:::
  Rat   403 V-TPVDSSEAKS---------------INKGAEQIGFELVEKLFQGQLVLRTRCLECESLTERRE 451

  Fly   685 GMLDISVPVPISGY----DNADLQDKPSTYIQ------NSCITKEYFRGENKYSCNQCTGYTEAI 739
            ...||||||.....    :::::..:|.|.::      :...:.|...||:||.|..|..||||.
  Rat   452 DFQDISVPVQEDELSKVEESSEISPEPKTEMKTLRWAISQFASVERIVGEDKYFCENCHHYTEAE 516

  Fly   740 RSISYEVLPRLLVIQLNRFS----------GGMEKVSTYVPTTFTLPCFCATCCELGEGNKLHV- 793
            ||:.::.:|.::.|.|..|:          ||:.|::|.:.|...|        .|.|.:....
  Rat   517 RSLLFDKMPEVITIHLKCFAASGLEFDCYGGGLSKINTPLLTPLKL--------SLEEWSTKPTN 573

  Fly   794 --YKLYSVITHVGATLTVGHYIAYTCFLDLASDYVNCPKDRRNTMTNSQTMASQAVPSNENAAPN 856
              |.|::|:.|.|.|::.|||.|.....||.|    ...|:.|.:.:......:..|.||..|
  Rat   574 DSYGLFAVVMHSGITISSGHYTASVKVTDLNS----LELDKGNFVVDQMCEIGKPEPLNEEEA-- 632

  Fly   857 NGSSSVASTPVIAAASALASSGNILMKKM-----KFGRSKASSSGDMSKNVKQVNGIISKNITNG 916
            .|::......|.......|....:|.||.     ..|..|:.:..::.........::....|:.
  Rat   633 RGTAENYDDEVSIRVGGNAQPSKVLNKKNVEGIGLLGGQKSKADYELCSKASNPEKVVGTPFTDS 697

  Fly   917 IGKLSISTTCQGVNCCAMRLCCTQQTSSSNSTSCSDFSEESL-QNGSNSNLSFGGSGSTYPTGYG 980
                                 ...:|:.:|.|..||.|:||. |.|.|.      ||......|
  Rat   698 ---------------------RNSETNDTNGTQESDRSKESSDQTGINV------SGLENKISY- 734

  Fly   981 STGRGGVRANYAHGGPDPIWYMCDDDKIKAMTQREFEELLSPTRKITITPYLLFYAR 1037
                 .|::...:.|.   |.:.||.::|...:::|...|||:...|.|||||||.:
  Rat   735 -----VVQSLKEYEGK---WLLFDDSEVKVTEEKDFLNSLSPSTSPTSTPYLLFYKK 783

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Usp1	NP_001263061.1	Peptidase_C19	308..819	CDD:271592	136/589 (23%)
Usp1	NP_001015015.1	Peptidase_C19	82..>253	CDD:271592	40/175 (23%)
		Peptidase_C19O	<424..599	CDD:239136	53/198 (27%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
eggNOG	1	0.900				E1_KOG1864
Hieranoid	1	1.000
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	135	1.000	Inparanoid score	I4413
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010				D210538at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	1	1.000				T1086838
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100			LDO	PTHR24006
Phylome	1	0.910		0.667	Consistency score
TreeFam	0	0.000	Not matched by this tool.
	7	6.970