Protein Alignment Usp1 and Usp38

DIOPT Version :10

• Sequence 1: NP_651687.3
• Gene: Usp1 / 43462
• FlyBaseID: FBgn0028476
• Length: 1078
• Species: Drosophila melanogaster
• Sequence 2: NP_001100888.2
• Gene: Usp38 / 307764
• RGDID: 1311974
• Length: 1041
• Species: Rattus norvegicus
• Alignment Length: 767
• Identity: 154/767 - (20%)
• Similarity: 234/767 - (30%)
• Gaps: 272/767 - (35%)

  Fly   317 LCNIGNSCYLNSVVYTLRFAPHFLHNLHHLIQDLNVVQQTIVRQQTARSASLGKNVSAAQLEHAR 381
            |.|:||:||:|||:..|..|..|...:  |..:||                 |.|....:|:|..
  Rat   447 LINLGNTCYMNSVLQALFMATEFRRQV--LSLNLN-----------------GCNSLMKKLQHLF 492

  Fly   382 SWSSKDLATSTDQYSGQNGGVNSGNGGSGSSKSTHQSVTEKLHELYNNLHGNEMADSTEPYHADT 446
            ::.:.   |..:.|:.:.  ....:.....:..:.|..:|.|..|.:.||..|.
  Rat   493 AFLAH---TQREAYAPRI--FFEASRPPWFTPRSQQDCSEYLRFLLDRLHEEEK----------- 541

  Fly   447 LLHAIQDVNATFEGNQQQDAHEFLMCVLNCIRE-TNQSLIKAIGECPEVIANGYIANPDEVDTGE 510
             :..||..:...||         |.|...|::| ||:                 :|.|.|..:..
  Rat   542 -ILRIQSSHKPSEG---------LGCTETCLQEVTNK-----------------VAVPSESPSTG 579

  Fly   511 GQDRTDSTASQNLNAGNGSLAT------SQTTTTKTSFFSRKSKRKDEVKPSKSTRVQSPLKENS 569
            |.::|...     ....|.|.|      .::|:.|...|:..|.   ...||.|
  Rat   580 GSEKTLIE-----KMFGGKLRTHICCLNCRSTSHKVEAFTDLSL---AFCPSPS----------- 625

  Fly   570 PTAGGITGAGTAHATANSLFYLNTVDLSGASSTSGSASTSASGVVSTSA--ALPTP----PQATK 628
                                    |:.|.....:...|....|::.||.  |...|    |.|..
  Rat   626 ------------------------VEDSSFQDPASLPSAQDDGLMQTSVTDAEEEPVVCNPAAAA 666

  Fly   629 YSSDDEMNSATVLKDKMRLEERIRELNLNFFSSDFEGIVVLTTKCLSCETITRQKQGMLDISVPV 693
            :..|..:|           |.|:....:.|..:....:...:.|.|..:.:.:...|....||
  Rat   667 FVCDSVVN-----------ERRLGSPPVEFPCAKNSSVPGESAKILVSKDVPQNPGGESTTSV-- 718

  Fly   694 PISGYDNADLQDKPSTYIQNSCITKEYFRGENKYSCNQCTGYTEAIRSISYEVLPRLLVIQLNRF 758
                           |.:.|..:..|...|||:|.|..|.....|.:::.....|..|::.|.||
  Rat   719 ---------------TDLLNYFLAPEVLTGENQYYCESCASLQNAEKTMQITEEPEYLILTLLRF 768

  Fly   759 SGG---------MEKVSTYVPTTFTLPCFCATCCELGEG-------------------------- 788
            |..         ::.||  :|....||....:...|.||
  Rat   769 SYDQKYHVRRKILDNVS--LPLVLELPVKRTSLSSLSEGWSADADFTDVNENLAKKLKPSGTEEA 831

  Fly   789 --NKLHVYKLYSVITHVGATLTVGHYIAYTCFLDLASDYVNCPKDRRNTMTNSQTMASQAVPSNE 851
              .||..|.|.||:.|.|.:...|||.:|.               |..|.|.|   :.|..|.:|
  Rat   832 FCPKLVPYLLSSVVVHSGVSSESGHYYSYA---------------RNITGTES---SYQMRPQSE 878

  Fly   852 NAA--PNNGSSSVASTPVIAAASALASSGNILMKKMK-----FGRSKASSSGDMS---------- 899
            :.:  |:..|.....:|.......|.:      |:|.     |..|:.:.:...|
  Rat   879 SLSLTPSQSSLLGGESPNTVIEQDLEN------KEMSQEWFLFNDSRVTFTSFQSVQKITSRFPK 937

  Fly   900 --------KNVKQVNGIISKNITNGI-------------------GKLSISTTCQGVNCCAMRLC 937
                    |...:.||:.|.|..:|:                   .||.:..  |.:|..|..|
  Rat   938 DTAYVLFYKKQSRTNGVRSDNPASGVWVNGEPPLQKELMDAITKDNKLYLQE--QELNARARAL- 999

  Fly   938 CTQQTSSSNSTSCSDFSEESLQNGSNSNLSFGGSGSTYPTGYGSTGRGGVRA 989
                  .:.|.|||     ...||.:.|   ...||..|||.|  |.||..|
  Rat  1000 ------QAASASCS-----FRPNGFDDN---DPPGSCGPTGGG--GGGGFNA 1035

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Usp1	NP_651687.3	Peptidase_C19	308..819	CDD:470612	109/551 (20%)
Usp38	NP_001100888.2	Peptidase_C19H	446..946	CDD:239129	125/657 (19%)