Protein Alignment Usp1 and usp-48

DIOPT Version :10

• Sequence 1: NP_651687.3
• Gene: Usp1 / 43462
• FlyBaseID: FBgn0028476
• Length: 1078
• Species: Drosophila melanogaster
• Sequence 2: NP_001361851.1
• Gene: usp-48 / 172782
• WormBaseID: WBGene00009267
• Length: 1264
• Species: Caenorhabditis elegans
• Alignment Length: 371
• Identity: 75/371 - (20%)
• Similarity: 127/371 - (34%)
• Gaps: 100/371 - (26%)

  Fly   544 SRKSKRKDEVKPSKSTRVQSPLKENSPTAGGITGAGTAHATANSLFYLNTVDLS------GASST 602
            :::.:.|:|.|..:..|     ..|...||.|.|....:..:....:.|..:..      ..|..
 Worm    85 TQEQETKEEAKKDQKRR-----DLNDQPAGLINGGNFCYVNSFLQVWFNVPEFRQLIYDFRPSEN 144

  Fly   603 SGSASTSASGVVSTSAALPT---PPQATKYSSDDEMNSATVLKDKMRL---EERIRELNLNFFSS 661
            ..........|.:|..||..   ..|.|.::..|:.::   |...:||   ::..:|..|.||::
 Worm   145 FVPPEAPRMNVQATMLALQDIFYTLQTTPFNETDKTSN---LGKLLRLNSEQQDSQEFGLKFFNA 206

  Fly   662 DFEGIVVLTTKCLS-------------------------CETITRQKQGMLDISVPVPISGYDNA 701
                    ..:||.                         |:...|.::....||:.:.|.||  .
 Worm   207 --------LERCLPDHPNGKETLKRLKDLFTGETCTRIVCKCGQRSEREETAISLTLNIEGY--C 261

  Fly   702 DLQDKPSTYIQNSCITKEYFRGE---NKYSCNQCTGYTEAIRSISYEVLPRLLVIQLNRF---SG 760
            .|.|....|.           ||   :.:.|::|....:..:...|..||.::||||||:   |.
 Worm   262 TLLDALDAYF-----------GEEHLDDFKCSKCNKTGDVSKQSDYVKLPPVIVIQLNRYKYTSK 315

  Fly   761 GMEKVSTYV--PTTFTLPCFCATCCELGEGNKL----HVYKLYSVITHVGATLTVGHYIAYTCFL 819
            |.:|:.|.:  |.......|..|      .|.:    .:|.|::|..|.|.....|||.
 Worm   316 GRQKLKTPMAYPREIPAKAFQRT------NNSIPPPAEMYDLFAVTIHEGNNAECGHYY------ 368

  Fly   820 DLASDYVNCPKDRRNTMTNSQTMASQAVPSNENAAPNNGSSSVAST 865
                |.:..|.:::....|.:  |.:|:|.    .|.....:.|.|
 Worm   369 ----DLIKSPLNQKWYRYNDE--AIEAIPK----PPGTEKPTTAKT 404

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Usp1	NP_651687.3	Peptidase_C19	308..819	CDD:470612	66/323 (20%)
usp-48	NP_001361851.1	UCH	108..393	CDD:425685	67/330 (20%)
		Ubl1_cv_Nsp3_N-like	1161..1264	CDD:475130