DRSC/TRiP Functional Genomics Resources

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Protein Alignment superdeath and LAP2

DIOPT Version :10

Sequence 1:NP_651674.3 Gene:superdeath / 43444 FlyBaseID:FBgn0039640 Length:999 Species:Drosophila melanogaster
Sequence 2:NP_014353.1 Gene:LAP2 / 855682 SGDID:S000004990 Length:671 Species:Saccharomyces cerevisiae


Alignment Length:773 Identity:155/773 - (20%)
Similarity:263/773 - (34%) Gaps:264/773 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 TPKYD-------RDVRLPHSIRPLKYNITIEPQLSGNFTFAGSVQIRIRVLEDCYNITMHAEELN 162
            :|:||       :|..:.|:  .|..:::.|..     ..:|||..:::.|.:..|   .::||:
Yeast    53 SPEYDQSTLSNYKDFAVLHT--DLNLSVSFEKS-----AISGSVTFQLKKLHEGKN---KSDELH 107

  Fly   163 ISRSDASVHRVQNNG-----------EPEGDGLRIHKQYLVGAKQFFVIELY----DKLLKDVEY 212
            :..|...|..|..:|           ||.|..|.|:.   ......|.:.:.    ||...    
Yeast   108 LDTSYLDVQEVHIDGSKADFQIEQRKEPLGSRLVINN---ASCNDNFTLNIQFRTTDKCTA---- 165

  Fly   213 VVHLRFDGIIEDYLQGFYRSSYEVHNETRWVASTQFQATDARRAFPCFDEPALKANFTLHIARPR 277
                         ||  :.:|.:......:|.| |.:|..||..|||||.|::|:.||..|..| 
Yeast   166 -------------LQ--WLNSKQTKGGKPYVFS-QLEAIHARSLFPCFDTPSVKSTFTASIESP- 213

  Fly   278 NMTTISNMPIVSSN---DHATMPSYVWDHFAESLPMSTYLVAYAISDFTHISSG-NFAVWARADA 338
                   :|:|.|.   :..:..:.:: .|.:.:|:..||:..|..|.:....| ...|:.....
Yeast   214 -------LPVVFSGIRIEDTSKDTNIY-RFEQKVPIPAYLIGIASGDLSSAPIGPRSTVYTEPFR 270

  Fly   339 IKSAEYALSVGPRILTFLQDFFNVTFP--------LPKIDMIALPEFQAGAMENWGLITFRETAM 395
            :|..::...  ..:..|:|....:.|.        |..:|     .:..|.||:..: ||....:
Yeast   271 LKDCQWEFE--NDVEKFIQTAEKIIFEYEWGTYDILVNVD-----SYPYGGMESPNM-TFATPTL 327

  Fly   396 LYDPGVATANNKQRVASVVGHELAHQWFGNLVTPSWWSDIWLNEGFASYMEYLTADAVAPE---- 456
            :       |:::..: .|:.|||||.|.|||||...|:..|||||:..|:|.....|:..|    
Yeast   328 I-------AHDRSNI-DVIAHELAHSWSGNLVTNCSWNHFWLNEGWTVYLERRIIGAIHGEPTRH 384

  Fly   457 ------WKQLDQFVVNELQAVFQLDALSTSHKISHEVFNPQEISEIFDRISYAKG-------STI 508
                  |..|.    |.:.::...:..||..:..::..:|   .:.|..:.|.||       .||
Yeast   385 FSALIGWSDLQ----NSIDSMKDPERFSTLVQNLNDNTDP---DDAFSTVPYEKGFNLLFHLETI 442

  Fly   509 IRMMAHFLTNPIFRRGLSKYLQEMAYNSATQDDLWHFLTVEAKSSGLLDDSRSVKEIMD-----T 568
            :...|.|  :|..|....|:.::........|.|:.|...:             |||:|     |
Yeast   443 LGGKAEF--DPFIRHYFKKFAKKSLDTFQFLDTLYEFYPEK-------------KEILDSVDWET 492

  Fly   569 WTLQTGYPVVKVSRHPNSDVIRLEQVRFVYTNTTREDESLLWYIPITFTTDSELNFANTRPTTWM 633
            |..:.|.|               .:..|                 ||...|:             
Yeast   493 WLYKPGMP---------------PRPHF-----------------ITALADN------------- 512

  Fly   634 PRTKLYELENRELSLAKWFIFNVQQTGYYRVNYDLENWMAITEHLMDVDNFE------DIAPANR 692
                :|:|.::                          |:.:.:||...::|.      ||...|.
Yeast   513 ----VYQLADK--------------------------WVEMAQHLKTTEDFRSEFNAIDIKDFNS 547

  Fly   693 AQLIDDVMNLARGSYLSYETAMNLTRYLGHELGHVPWKAAISNFIFIDSMFVNSGDYDLLK-NYL 756
            .||:           |..||   ||     :.||...|..               |:|..| ...
Yeast   548 NQLV-----------LFLET---LT-----QNGHSNKKPK---------------DFDWAKFPVA 578

  Fly   757 LKQLKKVYDQVGFKDSQDESEDILVKLKRADILSMACHLGHQECIAEASRHFQNWMQT 814
            .:.|..:|            :|.:||.:.|:::...........:.|..:|..:|:.|
Yeast   579 SRALLDIY------------QDNIVKSQNAEVVFKMFKFQIFAKLQEEYKHLADWLGT 624

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
superdeathNP_651674.3 M1_APN-Q_like 121..571 CDD:341064 112/498 (22%)
ERAP1_C 651..976 CDD:463368 30/171 (18%)
LAP2NP_014353.1 leuko_A4_hydro 57..669 CDD:274120 153/769 (20%)

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