DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment superdeath and Lvrn

DIOPT Version :10

Sequence 1:NP_651674.3 Gene:superdeath / 43444 FlyBaseID:FBgn0039640 Length:999 Species:Drosophila melanogaster
Sequence 2:NP_083284.1 Gene:Lvrn / 74574 MGIID:1921824 Length:991 Species:Mus musculus


Alignment Length:1053 Identity:320/1053 - (30%)
Similarity:498/1053 - (47%) Gaps:156/1053 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 SRPMNAATPTTTTTFSKGGRRYSVSLTTAILLASFFICTLLAVGFIVYNFATCAELEPD------ 83
            |||           ||.|   ..||...|:|||:.....||.:..:...:.:||.::|.      
Mouse     2 SRP-----------FSSG---VYVSRGVALLLAALTAVLLLVLVALASLYGSCAHVQPSEQGNSR 52

  Fly    84 -------------------SDEDVVCTSYHLRRLKAGHDDTPKYDRDVRLPHSIRPLKYNITIEP 129
                               :.|..|.||..|     |....| :|. :|||..:.||.|::.:.|
Mouse    53 VKNTSLWPPGGQEWALPTPAQEPTVGTSQDL-----GPPSGP-WDH-LRLPPWLVPLHYDLELWP 110

  Fly   130 QLS------GNFTFAGSVQIRIRVLEDCYNITMHAEELNISR-----------SDASVHRVQNNG 177
            .|.      .|.||.|.|.|.:|.......:.:|:..||..:           .:|:|.|||   
Mouse   111 WLQPDKLSPPNLTFTGRVNITVRCTVASSRLLLHSFLLNYKQVEVWGPLAQDTRNATVGRVQ--- 172

  Fly   178 EPEGDGLRIHKQYLVGAKQFFVIELYDKLLKDVEYVVHLRFDG-IIEDYLQGFYRSSYEVHNETR 241
                    :.|.:.....||.|::|...|.....|.:...|.| :::..|:|.:.:.|...:|.|
Mouse   173 --------VEKVWFAPDMQFVVLDLGQSLEPGSRYELSFHFSGQVLQVGLEGLFLNLYHDEDELR 229

  Fly   242 WVASTQFQATDARRAFPCFDEPALKANFTLHIARPRNMTTISNMPIVSSNDHATMPSYVWD---- 302
            .:.:||.:.|.||..|||||||||||.|.:.:........:||||.:..::...:....|.    
Mouse   230 ALVATQMEPTFARHVFPCFDEPALKATFNITVIHHPGYAALSNMPQLGQSERIDVNGSRWTVTTF 294

  Fly   303 HFAESLPMSTYLVAYAISDFTHIS----SGNFAVWARADAIKSA--EYALSVGPRILTFLQDFFN 361
            |....:|  |||||..:.|..|||    .....||||.|.|.|.  ::|.::...|.:||:|.||
Mouse   295 HTTPRMP--TYLVALVVCDLDHISRTERGKEIRVWARKDDIASGYLDFAANITGPIFSFLEDLFN 357

  Fly   362 VTFPLPKIDMIALPEFQAGAMENWGLITFRETAMLYDPGVATANNKQRVASVVGHELAHQWFGNL 426
            :::.|||.|::|||.|.:||||||||:.|.|:::|.:|.......:..:.|::.||:.|||||||
Mouse   358 ISYRLPKTDIVALPIFASGAMENWGLLIFDESSLLLEPEDELTEKRAMILSIIAHEVGHQWFGNL 422

  Fly   427 VTPSWWSDIWLNEGFASYMEYLTADAVAPEWKQLDQFVVNELQAVFQLDALSTSHKISHEVFNPQ 491
            ||.|||::||||||||||.|....:...|:......|....|..:...|....|..:|..|.|..
Mouse   423 VTMSWWNNIWLNEGFASYFELELTNYFYPKVPMNMIFFFTVLHGILGEDHALESRAVSTAVENFT 487

  Fly   492 EISEI---FDRISYAKGSTIIRMMAHFLTNPIFRRGLSKYLQEMAYNSATQDDLWHFLTVEAKSS 553
            |.|||   ||..:|.||:.:..|:|.||:..:|...|..||:..:|::|.|||||..:.:.....
Mouse   488 ETSEINRLFDLYTYKKGACMAWMLASFLSPHLFINALKSYLETFSYSNAEQDDLWRHIQMAIGEQ 552

  Fly   554 GLLDDSRSVKEIMDTWTLQTGYPVVKVSRHPNSDVIRLEQVRFVYTNTTREDESLL-----WYIP 613
            .:.....:||.|||:||.:.|:|::.|  :.::.|::.|.   .|.:.. |:::||     |.:|
Mouse   553 NVTHLPATVKGIMDSWTHRGGFPIITV--NVSTGVVKQEP---FYLDKV-ENQTLLSHNSTWIVP 611

  Fly   614 ITFTTDSELNFANTRPTTWM-------PRTKLYELENRELSLAKWFIFNVQQTGYYRVNYDLENW 671
            |.:     :.....:|..|:       |..||.:      |.:.|.|.|...|||||||||...|
Mouse   612 IFW-----MKNGIPQPLVWLDKSNMMFPGMKLSD------SDSDWVILNFNVTGYYRVNYDELGW 665

  Fly   672 MAITEHLMDVDNFEDIAPANRAQLIDDVMNLARGSYLSYETAMNLTRYLGHELGHVPWKAAISNF 736
            ..::|.| :.|. :.|...||.||:.|...|.:.:|:..|||::||:|:..|...:.|...:.|.
Mouse   666 KKLSEQL-EKDP-KAIPVINRLQLVSDAFALTKNNYIEIETALDLTKYIAEEDEILVWFEVLLNL 728

  Fly   737 IFIDSMF-VNS-GDYDLLKNYLLKQLKKVYDQVG--FKDSQDESED---ILVKLKRADILSMACH 794
            |..:.:: ||: ..|.|||.||||:...:::...  .:::....:|   .|..|:|  |...||.
Mouse   729 INREVIYDVNNYALYPLLKKYLLKRFNSIWNTYSAIIRENVASLQDNYLSLFSLER--IFETACW 791

  Fly   795 LGHQECIAEASRHFQNWMQTPNPDSNNPIVPNLRGVVYCSAIQYGTEYEWDFAFERFLKTNVPGE 859
            ||.::|:..:...|:.|  |.:|::..|  |.:...|.|||:..|::.:|||.|..::  |...|
Mouse   792 LGLEDCLQLSRELFKKW--TAHPETAIP--PQIENAVLCSAVALGSDKDWDFLFNLYI--NTTEE 850

  Fly   860 KD-----LLLNALGCSKEPWLLYRFLRRGISGQHIRKQDLFRVFAAVSTTVVGQNIAFDFLRNNW 919
            :|     .|::|:.|||:||:|.||:...|:.......:. .:...|:|:.||:.||.|||.:||
Mouse   851 EDESRRRRLVHAMSCSKDPWILNRFMEYAITAVSSNFSET-NIIVVVATSEVGRYIAKDFLMDNW 914

  Fly   920 QEIKTYMGSQMSSIHTLFKFATKGFNSKFQLGEFENFVKDAHWDYDRPVQQI------------V 972
            ..:....|  |..:..|.....:..::..|:.|.::|......::.|.|.|.            .
Mouse   915 VAVTERYG--MDWLDALVPVLGRTVSTDQQVTELQHFFSTVLEEHQRVVVQAKLQAMKTKNLQNK 977

  Fly   973 EHIETSVDWMNKN 985
            :.|...|:|:.||
Mouse   978 KRIARVVEWLRKN 990

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
superdeathNP_651674.3 M1_APN-Q_like 121..571 CDD:341064 164/480 (34%)
ERAP1_C 651..976 CDD:463368 103/348 (30%)
LvrnNP_083284.1 M1_APN-Q_like 102..570 CDD:341064 164/480 (34%)
ERAP1_C 645..964 CDD:463368 102/331 (31%)

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