DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment superdeath and Trhde

DIOPT Version :10

Sequence 1:NP_651674.3 Gene:superdeath / 43444 FlyBaseID:FBgn0039640 Length:999 Species:Drosophila melanogaster
Sequence 2:NP_001102461.1 Gene:Trhde / 366894 RGDID:728895 Length:1066 Species:Rattus norvegicus


Alignment Length:911 Identity:303/911 - (33%)
Similarity:486/911 - (53%) Gaps:60/911 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 VRLPHSIRPLKYNITIEPQLSGNFTFAGSVQIRIRVLEDCYNIT----MHAEELNISRSDASVHR 172
            :||...::||.||:.:...:. ||||:|.|.:.|.    |.|.|    :||       |..:|.:
  Rat   181 LRLSGHLKPLHYNLMLTAFME-NFTFSGEVNVEIA----CQNATRYVVLHA-------SRVAVEK 233

  Fly   173 VQNNGEPEGDGLRIHKQYLVGAKQFFVIELYDKLLKDVEYVVHLRFDGIIEDYLQGFYRSSYEVH 237
            ||...:.....:.:...:|....|..|:.|...|.....|.:.:.::.:||:.|.||:||||.:|
  Rat   234 VQVAEDRAFGAVPVAGFFLYPQTQVLVVVLNRTLDAQRHYNLKIIYNALIENELLGFFRSSYVIH 298

  Fly   238 NETRWVASTQFQATDARRAFPCFDEPALKANFTLHIARPRNMTTISNMPIVSS---NDHATMPSY 299
            .|.|::..|||..|.||:||||||||..||.|.:.|.......::||||:.:|   .|     .:
  Rat   299 GERRFLGVTQFSPTHARKAFPCFDEPIYKATFKISIKHQATYLSLSNMPVETSVFEED-----GW 358

  Fly   300 VWDHFAESLPMSTYLVAYAISDFTH----ISSGNFA-VWARADAIK--SAEYALSVGPRILTFLQ 357
            |.|||:::..||||.:|:||.:||:    ..||... ::||.|||:  |.:|||.:..|::.|.:
  Rat   359 VTDHFSQTPLMSTYYLAWAICNFTYRETTTKSGVVVRLYARPDAIRRGSGDYALHITKRLIEFYE 423

  Fly   358 DFFNVTFPLPKIDMIALPEFQAGAMENWGLITFRETAMLYDPGVATANNKQRVASVVGHELAHQW 422
            |:|.|.:.|||:|::|:|:....|||||||..|.|..:|.||.|::.:....|..|:.||:.|||
  Rat   424 DYFKVPYSLPKLDLLAVPKHPYAAMENWGLSIFVEQRILLDPSVSSISYLLDVTMVIVHEICHQW 488

  Fly   423 FGNLVTPSWWSDIWLNEGFASYMEYLTADAVAPEWK-QLDQFVVNELQAVFQLDALSTSHKISHE 486
            ||:||||.||.|:||.||||.|.|::..|.:.|.|. :..:|:.:.|..|..||.|::||.:|.|
  Rat   489 FGDLVTPVWWEDVWLKEGFAHYFEFVGTDYLYPSWNMEKQRFLTDVLHEVMLLDGLASSHPVSQE 553

  Fly   487 VFNPQEISEIFDRISYAKGSTIIRMMAHFLTNPIFRRGLSKYLQEMAYNSATQDDLWHFLTVEAK 551
            |....:|.::||.|:|.||:.:|||:|:|:.:.:|:|||..||....|.:|.::|||:.|:...|
  Rat   554 VLRATDIDKVFDWIAYKKGAALIRMLANFMGHSVFQRGLQDYLTIHKYGNAARNDLWNTLSEALK 618

  Fly   552 SSGLLDDSRSVKEIMDTWTLQTGYPVVKVSRHPNSD-VIRLEQVRFVYTNTTR------EDESLL 609
            .:|   ...:::|:||.||||.||||:.:..:..:: .|.:.|..|:|....:      ::.|.|
  Rat   619 RNG---KYVNIQEVMDQWTLQMGYPVITILGNMTAENRILITQQHFIYDIGAKTKALQLQNSSYL 680

  Fly   610 WYIPITFTTDSELNFANTRPTTWMPRTKLYELENRE---LSLAKWFIFNVQQTGYYRVNYDLENW 671
            |.||:|....:. :..::....|:..    :.|:..   |....|.:.|:.||||:||||||.||
  Rat   681 WQIPLTIVVGNR-SHVSSEAIIWVSN----KSEHHRITYLDKGSWILGNINQTGYFRVNYDLRNW 740

  Fly   672 MAITEHLMDVDNFEDIAPANRAQLIDDVMNLARGSYLSYETAMNLTRYLGHELGHVPWKAAISNF 736
            ..:.:.|  :.|.|.::.:|||.||||..:|||..||.....:.:.|||..|...:||.||....
  Rat   741 RLLIDQL--IRNHEVLSVSNRAGLIDDAFSLARAGYLPQNIPLEIIRYLSEEKDFLPWHAASRAL 803

  Fly   737 IFIDSMFVNSGDYDLLKNYLLKQLKKVYDQVGFKDSQDESEDILVKLK----RADILSMACHLGH 797
            ..:|.:.....:|::...|:|||:...|.::|:..:......:....:    |.:::.:||..|:
  Rat   804 YPLDKLLDRMENYNIFNEYILKQVATTYSKLGWPKNNFNGSVVQASYQHEELRREVIMLACSFGN 868

  Fly   798 QECIAEASRHFQNWMQTPNPDSNNPIVPNLRGVVYCSAIQYGTEYEWDFAFERFLKTNVPGEKDL 862
            :.|..:||....:|:.:    :.|.|..|:|.:|||:.:....|..|:|.:.:|..|....||.:
  Rat   869 KHCHQQASTLISDWISS----NRNRIPLNVRDIVYCTGVSLLDEDVWEFIWMKFHSTTAVSEKKI 929

  Fly   863 LLNALGCSKEPWLLYRFLRRGISGQHIRKQDLFRVFAAVSTTVVGQNIAFDFLRNNWQEIKTYMG 927
            ||.||.||.:..||.|.|...::.:.:..||...|...|:....|:::|:.|.|:.|:.:.|..|
  Rat   930 LLEALTCSDDRNLLSRLLNLSLNSEVVLDQDAIDVIIHVARNPHGRDLAWKFFRDKWKILNTRYG 994

  Fly   928 SQMSSIHTLFKFATKGFNSKFQLGEFENFVKDAHWDYDRPVQQIVEHIETSVDWMNKNYKSIVRW 992
            ..:.....|....|:..|::.:|.|.:||:|...........:.||.:|.:|.|.......:.:|
  Rat   995 EALFMNSKLISGVTEFLNTEGELKELKNFMKSYDGVASASFSRAVETVEANVRWKRLYQDELFQW 1059

  Fly   993 L 993
            |
  Rat  1060 L 1060

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
superdeathNP_651674.3 M1_APN-Q_like 121..571 CDD:341064 177/464 (38%)
ERAP1_C 651..976 CDD:463368 98/328 (30%)
TrhdeNP_001102461.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..43
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 117..177
M1_APN-Q_like 190..635 CDD:341064 177/464 (38%)
ERAP1_C 720..1044 CDD:463368 98/329 (30%)
Blue background indicates that the domain is not in the aligned region.

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