DRSC/TRiP Functional Genomics Resources

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Protein Alignment superdeath and VB0395L.1

DIOPT Version :10

Sequence 1:NP_651674.3 Gene:superdeath / 43444 FlyBaseID:FBgn0039640 Length:999 Species:Drosophila melanogaster
Sequence 2:NP_001024932.1 Gene:VB0395L.1 / 3564909 WormBaseID:WBGene00044150 Length:340 Species:Caenorhabditis elegans


Alignment Length:366 Identity:80/366 - (21%)
Similarity:129/366 - (35%) Gaps:82/366 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 FICT---LLAVGFIVYNFATCAELEPDSDEDVVCTSYHLRRLKAGHDDTPKYDRDVRLPHSIRPL 121
            |:.|   |.|:..|:|.|.....|              |.:.....::.|.     .:|:...|.
 Worm    16 FLLTWLVLSAIACIIYVFVVFGSL--------------LNKTVLPSNNVPS-----TIPYITVPS 61

  Fly   122 KYNITIEPQLSGNFT-------FAGSVQIRIRVLEDCYNITMHAEELNISRSDASVHRVQNNGEP 179
            :||:.    |..|.|       :.||:|:.. |..|   ||   ::|...|||    :|:.|...
 Worm    62 EYNVF----LQFNSTPEAVVREYTGSLQMDF-VARD---IT---QQLFFHRSD----KVKINSIS 111

  Fly   180 EGDGLRIHKQYLVGAKQFFVIELYDK------------LLKDVEYVVHLRFDGIIEDYLQGFYRS 232
            ..|..........||        |||            |.....||:.:.|.|.::.........
 Worm   112 LEDANGTMTAPTAGA--------YDKSTGVQAYIPLANLTSQESYVLRIDFQGELDSETGSPRNL 168

  Fly   233 SYEVHNET-RW---VASTQFQATDARRAFPCFDEPALKANFTLHIARPRNMTTISNMPIVSSNDH 293
            .|.:.|.| |:   ..::...::..|...||.|.|...|.|..:|........|||.    :...
 Worm   169 QYSLPNGTIRYSIVFGNSVTSSSGLRYLMPCLDSPDFPAVFNFNIRHSPRYRVISNF----AGQI 229

  Fly   294 ATMPSYVWDHFAESLPMSTYLVAYAISDFTHISSGNFAVWARADAIK-SAEYALSVGPRILT--F 355
            .....|....||.|..:.:..|..|:.| |.::    .|..:.:.:. :..|..|:...|.|  .
 Worm   230 QQSILYTATLFAGSFQLDSSQVVLALID-TELA----PVTVQQNGLTINKYYRQSIVDNISTDRI 289

  Fly   356 LQDFFNVTFPLPKIDMIALPEFQAGAMENWGLITFRETAML 396
            :|.....:..:.|||::|||:..  |.:..|:..:.|..:|
 Worm   290 IQFMATRSQQIGKIDVLALPDLT--ATQQPGITFYNENDVL 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
superdeathNP_651674.3 M1_APN-Q_like 121..571 CDD:341064 68/302 (23%)
ERAP1_C 651..976 CDD:463368
VB0395L.1NP_001024932.1 GluZincin 63..>224 CDD:472708 42/183 (23%)
Blue background indicates that the domain is not in the aligned region.

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