DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment superdeath and erap1

DIOPT Version :10

Sequence 1:NP_651674.3 Gene:superdeath / 43444 FlyBaseID:FBgn0039640 Length:999 Species:Drosophila melanogaster
Sequence 2:XP_002933475.2 Gene:erap1 / 100496768 XenbaseID:XB-GENE-983344 Length:932 Species:Xenopus tropicalis


Alignment Length:961 Identity:322/961 - (33%)
Similarity:516/961 - (53%) Gaps:102/961 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 VVCTSYHLRRLKAGH---DDTPKYD-RDVRLPHSIRPLKYNITIEPQLSGNFTFAGSVQIRIRVL 148
            ::|.|:.::...|..   |:...:. :::|||....||.|::.|.|.|: ..||:|..::.:.|.
 Frog    23 LMCISFSIQPALAASKALDNAEMFPWKNLRLPTFAAPLHYDLLIHPNLT-TLTFSGLTKVTVTVT 86

  Fly   149 EDCYNITMHAEELNISRSDASVHRVQNNGEPEGDGLRIHKQYLVGAKQFFVIELYDKLLKDVEYV 213
            :....:.:|::.|.|:::  ::.| :...:|....|.:.:.   ...:...:...|.|:....|.
 Frog    87 QKTSFLVLHSKHLEITKT--TIKR-KLGKDPVLQDLLLREH---PVNEQIALLAADPLIPGENYT 145

  Fly   214 VHLRFDGIIEDYLQGFYRSSYEVHN-ETRWVASTQFQATDARRAFPCFDEPALKANFTLHIARPR 277
            :::.::..:....:|||:|:|:..: |.|.:|||||:.|.||.|||||||||.||:|::.|.|..
 Frog   146 IYIEYNANLSKNFRGFYKSTYKTKDGEVRVLASTQFEPTAARTAFPCFDEPAFKASFSIQIRREP 210

  Fly   278 NMTTISNMPIVSSNDHATMPSYVWDHFAESLPMSTYLVAYAISDFTHIS-----SGNFAVWARAD 337
            ....:||||:|.:.:..  ...:.||||.|:.|||||||:.:|||..||     ....:|:|..:
 Frog   211 KHHAVSNMPVVKTVNIG--GGLLEDHFAASVKMSTYLVAFIVSDFKSISQVTNHGVRISVYATPE 273

  Fly   338 AIKSAEYALSVGPRILTFLQDFFNVTFPLPKIDMIALPEFQAGAMENWGLITFRETAMLYDPGVA 402
            .|..|||||....::|.|.:|:||:::||||.|:.|:|:||:||||||||.|:||:|:|:||..:
 Frog   274 KIDQAEYALKAAVKLLDFYEDYFNISYPLPKQDLAAIPDFQSGAMENWGLTTYRESALLHDPKTS 338

  Fly   403 TANNKQRVASVVGHELAHQWFGNLVTPSWWSDIWLNEGFASYMEYLTADAVAPEWKQLDQFVVNE 467
            ||::|..|..::.|||||||||||||..||:|:|||||||.:|||::.....|| .|::.:.:::
 Frog   339 TASHKLWVTMIIAHELAHQWFGNLVTMEWWNDLWLNEGFAKFMEYVSVRVTYPE-LQVEDYFLDK 402

  Fly   468 LQAVFQLDALSTSHKISHEVFNPQEISEIFDRISYAKGSTIIRMMAHFLTNPIFRRGLSKYLQEM 532
            ......:|:|::||.:|..|.||:||.|:||.:||.||:.|:.|:..::....|..|:..||:..
 Frog   403 CFRAMDVDSLNSSHAVSTPVENPEEIQEMFDEVSYDKGACILNMLMDYMGAESFEAGIVDYLRRY 467

  Fly   533 AYNSATQDDLWHFLT----VEAKSSGLLDDSR-----------SVKEIMDTWTLQTGYPVVKVSR 582
            :|.:|..:|||:.:|    .:..:||....:|           .||.:|:|||||.|:|:|.|: 
 Frog   468 SYRNARNEDLWNSMTDVCPSDETNSGYCTKTRQTSHWSEGEIIDVKSMMNTWTLQKGFPLVTVT- 531

  Fly   583 HPNSDVIRLEQVRFVYTNTTREDESLLWYIPITFTTDSELNFANT-RPTTWMPRTKLYELENREL 646
             .....:.|.|..::..:|..|...|||:||:|:.|..    :|| :....|.:|.:..|...  
 Frog   532 -VKGKYVYLHQEHYLKGSTDTEASGLLWHIPLTYITSK----SNTVQRFLLMSKTDVLVLAEE-- 589

  Fly   647 SLAKWFIFNVQQTGYYRVNYDLENWMAITEHLMDVDNFEDIAPANRAQLIDDVMNLARGSYLSYE 711
              .:|..|||...|||.|:|:.|.|.|:.:.|.  :|...|:..:||.||:....|.....|..:
 Frog   590 --VEWIKFNVGMNGYYIVHYEGEGWDALIKLLQ--ENHTAISSNDRANLINSAFQLVSIGRLPID 650

  Fly   712 TAMNLTRYLGHELGHVPWKAAISNFIFI-------DSMFVNSGDYDLLKNYLLKQLKKVYDQVGF 769
            .|::|:.||.:|...:|....:...|.|       |...|.|    .:|.|:|..|:|:.|...:
 Frog   651 KALSLSLYLKNEDKIMPVFQGMDELIPIYKLMEKRDMQEVES----QMKKYILNLLRKLIDAQSW 711

  Fly   770 KDSQDESEDILVKLKRADILSMACHLGHQECIAEASRHFQNWMQTPNPDSNNPI-VP-NLRGVVY 832
            .|....||.:|    |:.:|..||...:|.|:..|.::|:.|.     :||..| :| ::...||
 Frog   712 TDEGSVSERML----RSSLLLFACVRQYQPCVQRAEQYFKRWQ-----ESNGTISLPRDVASAVY 767

  Fly   833 CSAIQYGTEYEWDFAFERFLKTNVPG-EKDLLLNALGCS----KEPWLLYRFLRRGISGQHIRKQ 892
            ....|  |...|||.||:: ||.:.| ||:.:..||..:    |..||    :..|:.|.|:|.|
 Frog   768 AVGAQ--TPEGWDFLFEKY-KTTLSGSEKNQIELALAITSLKHKLQWL----MEEGMKGDHVRTQ 825

  Fly   893 DLFRVFAAVSTTVVGQNIAFDFLRNNWQEI--KTYMGSQMSSIHTLFKFATKGFNSKFQLGEFEN 955
            ||..:...||...||..::::||:|||..:  |..:||:  ::..:....||.:::|..|.|...
 Frog   826 DLPHIVLYVSRNPVGYPLSWEFLKNNWGNLVQKFELGSR--TVGDMVVGITKQYSTKEWLEEVTG 888

  Fly   956 FVKDAHWDYD---------RPVQQIVEHIETSVDWMNKNYKSIVRWLENEA 997
            |       :|         |.|||..|.||.::.||:||...:..||||.:
 Frog   889 F-------FDSLKEMGSQLRCVQQARETIEENIRWMDKNLDLVKSWLENNS 932

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
superdeathNP_651674.3 M1_APN-Q_like 121..571 CDD:341064 176/470 (37%)
ERAP1_C 651..976 CDD:463368 105/349 (30%)
erap1XP_002933475.2 M1_APN-Q_like 60..521 CDD:341064 176/470 (37%)
ERAP1_C 592..911 CDD:463368 105/349 (30%)

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