DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment superdeath and lvrn

DIOPT Version :10

Sequence 1:NP_651674.3 Gene:superdeath / 43444 FlyBaseID:FBgn0039640 Length:999 Species:Drosophila melanogaster
Sequence 2:XP_031748993.1 Gene:lvrn / 100496094 XenbaseID:XB-GENE-980447 Length:990 Species:Xenopus tropicalis


Alignment Length:1017 Identity:311/1017 - (30%)
Similarity:521/1017 - (51%) Gaps:95/1017 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 KGGRRYSVSLTTAILLASFFICTLLAVGFIVYNFATCAELEPDSDEDVVCTSYHLRRLKAGHDDT 105
            |....:.:|.|:|:||.......:|.|..:...:|.    .|.....:..||..|..: |...|.
 Frog     4 KSSSGFYLSRTSAVLLTLLLAALILVVIILGALYAR----TPQRSHHICDTSTSLENI-AEPTDR 63

  Fly   106 PKYDRDVRLPHSIRPLKYNITIEPQL----SGNFTFAGSVQIRIRVLEDCYNITMHAEELNISRS 166
            |....::||||::.||.|::.:.|::    .||:.|:|.|.|.|..:||...:.:|:.:||.  |
 Frog    64 PGIWNNLRLPHNLVPLHYDLELWPRMEEDEEGNYPFSGQVNITISCVEDTDVVLLHSIQLNF--S 126

  Fly   167 DASV------------------HRVQNNG-------EP----EGDGLRIHKQYLVGAKQFFVIEL 202
            |..:                  |.....|       :|    .|..:.|:..:......:.|:||
 Frog   127 DVGLRLLGNKTIMYQSMEKDGKHNALQEGRAYKRLQDPTYDIHGGNVSINNVWTFEDHSYVVLEL 191

  Fly   203 YDKLLKDVEYVVHLRFDGIIEDYLQGFYRSSYEVHNETRWVASTQFQATDARRAFPCFDEPALKA 267
            .::|:....|::.|.:.|.|... ...:.:.|:..|..:.|.::..:...||..:||||||||||
 Frog   192 NERLVAGNLYLLELNYTGFIRQN-TALFITHYKDFNIDKAVVASLLEPEYARAVYPCFDEPALKA 255

  Fly   268 NFTLHIARPRNMTTISNMPIVSSNDHATMPSYVW--DHFAESLPMSTYLVAYAISDFTHIS---S 327
            .|.:.:....:...:||||.|:.::...:...:|  ..|..:..||||:.|:.|.||.:::   .
 Frog   256 TFKIRLVHNSSYVALSNMPAVAVSEREDIDGSIWTVTTFDTTPKMSTYITAFVICDFDYVNITER 320

  Fly   328 GN-FAVWARADAIKS--AEYALSVGPRILTFLQDFFNVTFPLPKIDMIALPEFQAGAMENWGLIT 389
            || ..||||.:.::.  |..|||:...:|::::|.|||::||.|.|.:|||:....|||||||||
 Frog   321 GNEIRVWARKEVVQKGFASLALSIAGPLLSYMEDLFNVSYPLQKTDFVALPDLDVEAMENWGLIT 385

  Fly   390 FRETAMLYDPGVATANNKQRVASVVGHELAHQWFGNLVTPSWWSDIWLNEGFASYMEYLTADAVA 454
            |.|.|::|||...::|:|.|.:.:|.||:||||||||||..||:|:|||||||:||||.....:.
 Frog   386 FIEEALIYDPRQKSSNSKFRTSLIVSHEIAHQWFGNLVTMKWWTDLWLNEGFATYMEYFGITFLD 450

  Fly   455 PEWKQLDQFVVNELQAVFQLDALSTSHKIS--HEVFNPQEISEIFDRISYAKGSTIIRMMAHFLT 517
            .:.:..:.|.::.||.:|:.|..:.:..:|  .|.....:.|.:|:..:|.|||.::||::.|||
 Frog   451 SKLELNELFTMHNLQPIFERDVGAHAKTVSMKEEELYEADSSHMFNEFTYDKGSALVRMLSSFLT 515

  Fly   518 NPIFRRGLSKYLQEMAYNSATQDDLWHFLTVEAKSSGLLDDSRSVKEIMDTWTLQTGYPVVKVSR 582
            ..:|.:|:|.||:..::::..|||||:.|.:.......:....:::.||.:||.|.|.|::.:  
 Frog   516 EKLFIKGISSYLKTFSFSNVDQDDLWNHLQMFIDHQDEVRLPTTLRHIMQSWTWQRGIPLLTL-- 578

  Fly   583 HPNSDVIRLEQVRFVYTNTTR--EDESLLWYIPITFTTDSELNFANTRPTTWM-PRTKLYELENR 644
              ::....|.:..|...||..  .|.:..|.:|:|:     :.....:.:.|: .::|::.:   
 Frog   579 --DTTTGELAEELFKTDNTDNITSDSNHTWIVPVTW-----MKNGTKQISLWLDSKSKVFPV--- 633

  Fly   645 ELSLA--KWFIFNVQQTGYYRVNYDLENWMAITEHLMDVDNFEDIAPANRAQLIDDVMNLARGSY 707
             |:.|  :|.:.|:..|||||.||:.|||..:.:.|  ..|.:.:...||.|||:|...|||..|
 Frog   634 -LTTAADEWIVLNINVTGYYRTNYNKENWNRLAKQL--EANPKVVPTVNRIQLIEDAFILARYGY 695

  Fly   708 LSYETAMNLTRYLGHELGHVPWKAAISNFIFIDSMFVNSGDYDLLKNYLLKQLKKVYDQVGFKDS 772
            ..:.||::||:||..|.....|...:.:....|...:...::.|.|.|:||::..:|.:  |.:|
 Frog   696 TDHGTALSLTKYLEKEEEINVWYTVLKHVTSSDYPLITYTNFPLFKKYILKRISPIYQR--FANS 758

  Fly   773 -----QDESEDILVKLKRADILSMACHLGHQECIAEASRHFQNWMQTPNPDSNNPIVPNLRGVVY 832
                 .:.::|..:::....||..||..|.|:|:..|.:.:..||:.   .|.|.|..::|..:.
 Frog   759 IRRNFDEAADDYFIQVHIELILKTACSFGLQDCLQLAHQLYATWMKN---CSGNVIPESIRNPIC 820

  Fly   833 CSAIQYGTEYEWDFAFERFLKTNVPGEKDLLLNALGCSKEPWLLYRFLRRGISGQHIRKQDLFRV 897
            |.||..|.|.||:||::...|:. ..|:|||..||.|:||||||:|:|...:   .:.|...|.:
 Frog   821 CYAIANGGEKEWEFAWKMVNKSE-EIERDLLFYALSCTKEPWLLHRYLEYSL---EMYKSSAFTI 881

  Fly   898 FAAVSTTVVGQNIAFDFLRNNWQEIKTYMGSQMS-SIHTLF--KFATKGFNSKFQLGEFENFVKD 959
            |..|....:|::||::||:.|||.|....|.:.: ..:|:.  .||:|. .|..|..|.:.|:..
 Frog   882 FLDVIKNEIGRHIAWEFLKENWQRIHDIFGPRDTVDFYTVLLPTFASKA-ASDLQFQEIQLFINT 945

  Fly   960 AHWDYDRPVQQIVEHIET----SVDWMNKNYKSIVRWLENEA 997
            ...:..|  ::|:|.:|.    |:.|.:|....|:.||:..|
 Frog   946 TINENQR--ERILEQVENKWRKSLGWTSKINDEILTWLQRNA 985

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
superdeathNP_651674.3 M1_APN-Q_like 121..571 CDD:341064 160/492 (33%)
ERAP1_C 651..976 CDD:463368 106/332 (32%)
lvrnXP_031748993.1 M1_APN-Q_like 79..568 CDD:341064 159/491 (32%)
ERAP1_C 641..945 CDD:463368 103/315 (33%)

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