DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bicra and bicral

DIOPT Version :10

Sequence 1:NP_001263051.1 Gene:Bicra / 43435 FlyBaseID:FBgn0039633 Length:3003 Species:Drosophila melanogaster
Sequence 2:XP_005156436.1 Gene:bicral / 559084 ZFINID:ZDB-GENE-100716-3 Length:856 Species:Danio rerio


Alignment Length:842 Identity:175/842 - (20%)
Similarity:285/842 - (33%) Gaps:256/842 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly  1669 MSASIQPF--------QTTSGTKLVGVTVPMQ-QQQPTGTAAILQQQQQQRTSFSLTATTVATPA 1724
            :|:|: ||        .:..|..|.|...|.. .|:....|.|.:|...|........:.:.|..
Zfish   111 LSSSL-PFIEDDLDSETSADGVDLGGEDQPFDILQKSLLEADITEQTLAQEALLDSQPSLIPTAT 174

  Fly  1725 PMPSPTVASGVSQLQMQQLPSQQAQQQLQPQQQQQLHAPKQQQPQPN--------------TVSR 1775
            ..|...|:.|.:.:....:.:..||.|...||..||       |.||              :.|.
Zfish   175 AFPQQLVSGGFAGVAGPGVVAPLAQPQAFIQQVPQL-------PLPNGPAGHIQVVGSFNGSASS 232

  Fly  1776 VQTIQLTPQMQQIFK------------------QVQMQIQFLTIKLQN---------KSTFLPVS 1813
            :.||....|.|.:.:                  ||.|.....||.:||         ::...|:.
Zfish   233 MMTINSLEQPQILLRQSGNNSGQGTMFAPSTPNQVSMSFNKGTIPVQNIIIQRGPTQQTLVRPIQ 297

  Fly  1814 PE-IDSATIAAYNKPMTDAEINLALQRLFAEQHRILASGKEVPTPEGMLPTANGTGGFSLMPQPV 1877
            |: :.:.....||..      |:.:|........:::|..          ||.|:      |||.
Zfish   298 PKPLQTGGQTVYNIS------NIGIQPSTTTAGNLVSSAY----------TATGS------PQPA 340

  Fly  1878 QQQQ---------------QQQQQQLQSTVPE------------PLKTI-----VPANVVQPNNH 1910
            ||.:               ||.|.|.||.:|:            |..|:     |...|:|.|  
Zfish   341 QQVKVVNPASSIVMHSPLGQQAQTQSQSNLPQGQFLLPSSISLTPGTTVHGFQAVNGQVLQGN-- 403

  Fly  1911 SSTPAGAATSGATTAANIQQNITQRIHIYPMQHQQQQQQQQQQQQQQPQHQQQQPQHQLQQTGAK 1975
              |..|..:|.:||..:|..|....:.:...|:.....|....|.              ..:|.:
Zfish   404 --TQVGDPSSMSTTTYSILTNQNTTVQLIAGQNFSAGGQLIVNQG--------------LVSGGQ 452

  Fly  1976 PKQAQPKPPPQQEQQSQLQIKPKEPANRSKVTSQQLQQNPQPPNGT-----INMLPQKVSMMPVV 2035
            ..||.|.|..|..|:         ||..:||.:.....:|.|...|     :.|:...| ..|.|
Zfish   453 IGQASPTPVVQVSQR---------PAAAAKVWTSSASPSPTPVQATQTSSHLTMISSGV-QGPQV 507

  Fly  2036 QQQQQQQPQQHQQQPMLNKSGPPPLIFASSTN-----MLSNSNSNNLHNSNSAMQVNNMLPLPPL 2095
            .||....|.||...|:...        ||:|:     .:|.:............|:.|:|     
Zfish   508 CQQLSVNPGQHLLMPVGQN--------ASATSGFQEFQVSLNQDTTAATQRGQTQLVNLL----- 559

  Fly  2096 QPQQQPQPQLQQPPTPILPPVAPTMAMGVAPGPMGNLVPSLPTIPSLPLYMPSKMDEMPTQKPKI 2160
                         .|.:|.|:.|..             ..||..|..|          .||  ::
Zfish   560 -------------GTKVLKPLTPAS-------------QELPLTPKRP----------ATQ--QL 586

  Fly  2161 ARLSLFVRQLEVDQESCLKPDYVKPFRTKDEAVKRLIRYHCMHENDVELPSDE-----DEEFEST 2220
            .|..|.::||..|....|..|.. ||.:.::.:.||:.||....:.   |.||     |||||:.
Zfish   587 TRGELVLQQLRQDHSRVLSSDRT-PFSSLNDVIDRLLPYHVFQGSP---PQDEDFAKVDEEFEAV 647

  Fly  2221 ALEFQDKFRQLNGKFQEILMQESTLPHRTSELLQMQQLMIDDLKGEINEIR-------------- 2271
            |.:...:.:.:..|::.:||.|:.....:||::.:.:....:.:|.:.:.:              
Zfish   648 ATQVLSRTQAMVNKYRRLLMVEAERSSPSSEMVMIDRTFNQEERGNLTQDKRMVLVDPDSFLEEF 712

  Fly  2272 --------TAEKELEQQLKEEQTSEKSTAESDVLS-------------EAKVKEEIKQEPIDKSA 2315
                    .:.:.|.....|::.|:..|:.|..:|             |...:.|.:|:.:::..
Zfish   713 CCGPKRKIPSPEVLTPASHEDKPSKMETSPSHSISHTGRDGQSMNSHTETTYRTESQQQEMEEHR 777

  Fly  2316 Q-PDGVVDKFDLLKNSADVNKAF-SKSQPQQTTTVKQEESNESGEPSVNGSVKSEGHDKESS 2375
            : |...:  .||.|.::  |..| ||||..|..|    ..|:|.:.|..|...:.||:::.|
Zfish   778 RTPIKCI--LDLKKKTS--NSVFGSKSQHAQYPT----SPNQSQQSSAQGYPSNPGHEQKLS 831

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BicraNP_001263051.1 PHA03247 <753..1222 CDD:223021
GLTSCR1 2173..2271 CDD:464589 25/102 (25%)
SCP-1 <2212..2476 CDD:114219 43/206 (21%)
bicralXP_005156436.1 GLTSCR1 599..699 CDD:464589 25/103 (24%)
Blue background indicates that the domain is not in the aligned region.

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