DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Slu7 and SMP2

DIOPT Version :9

Sequence 1:NP_651659.2 Gene:Slu7 / 43427 FlyBaseID:FBgn0039626 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_568017.1 Gene:SMP2 / 829866 AraportID:AT4G37120 Length:536 Species:Arabidopsis thaliana


Alignment Length:571 Identity:238/571 - (41%)
Similarity:318/571 - (55%) Gaps:71/571 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 KSREDWRKAKELEEARKAGTAPAAVDEEGRDINPHIPQYISNAPWYYGSAGPTLKHQRP-QHEDE 92
            |||||.||..|||||||||.|||.|||:|::||||||:|:|.||||..|..|:||||:. :.|.|
plant     9 KSREDHRKKLELEEARKAGLAPAEVDEDGKEINPHIPEYMSKAPWYLKSEQPSLKHQKNWKIEPE 73

  Fly    93 QGQLDKRAPKGLNTARIITKFRKGACENCGAVTHKRKDCLERPRKVQAKYAESIVVHDEHLVNEA 157
            ..::.....|.:..|.   ::|||||.||||:||..|.|::||||:.|||....:..||. :...
plant    74 PKKIWYDRGKKIYQAE---QYRKGACINCGAMTHSSKACMDRPRKIGAKYTNMNIAADEK-IESF 134

  Fly   158 AVNYDEKRDRWSSYDPANHREIIEEYEKVEEA-KRQLKAEKLK---------NDPDAEISDEEGN 212
            .::||.|||||:.||.:.:|.:::.|:..||| |:.||.::||         |..||....||..
plant   135 ELDYDGKRDRWNGYDTSTYRHVVDRYDAKEEARKKYLKEQQLKKLEEKNNNENGDDATSDGEEDL 199

  Fly   213 EDKYVDE--VD----MPGTKVDSKQRI-------TVRNLRIREDTAKYLRNLDPNSAYYDPKTRS 264
            :|..|||  ||    |...||:.:.|.       |||||||||||||||.|||.|||:|||||||
plant   200 DDLRVDEAKVDESRQMDFAKVEKRVRTTGGGSTGTVRNLRIREDTAKYLLNLDVNSAHYDPKTRS 264

  Fly   265 MRDNPNPAVPEEEAEFAGENFVRFSGDTTAQATAQLFAWEAHGKGVDVHLLAEPTKLELLQKEYE 329
            ||::|.|.....|..:.|:|..|.||.........:.:.||..||.|:|:.|.|::.|||.|.::
plant   265 MREDPLPDADPNEKFYLGDNQYRNSGQALEFKQINIHSCEAFDKGHDMHMQAAPSQAELLYKNFK 329

  Fly   330 QKKEQFKSSTKTHIVEKYGGEEHLQVPPKSLLLAQTEEYIEYSRSGKVIKGVEKPKARSIYEEDV 394
            ..||:.|:.||..|:||||........|..|||.|:|..|||.|:|:::||.|....:|.|||||
plant   330 VAKEKLKTQTKDTIMEKYGNAATEGEIPMELLLGQSERQIEYDRAGRIMKGQEVIIPKSKYEEDV 394

  Fly   395 YINNHTTVWGSFWNAGRWGYKCCKSFIKNSYCVGMQEPEGYSEHHSTSSTAAATTEPAAQSQFKV 459
            :.||||:||||:|...:||||||:..|:||||.|                 :|..|.|..|    
plant   395 HANNHTSVWGSWWKDHQWGYKCCQQTIRNSYCTG-----------------SAGIEAAEAS---- 438

  Fly   460 PEVPPERPTSEVDSASSSEPSSSEEEEVKPEKKKTKKKSKKREKKKKAKEQRKQKGKNKETKDKD 524
                     .::..|:.:...:|:|...|.|:||.........:..:..|:.......||  |..
plant   439 ---------IDLMKANIARKEASKESPKKVEEKKMATWGTDIPEDLELNEEALANALKKE--DLS 492

  Fly   525 KTKEKDIPEELDDRKRAYNSMY--DVKAPTEDEIEEWKKKRPRAEDPMLQF 573
            :.:||      |:|||.||..|  ||   |.:|:|.::.||...||||..|
plant   493 RREEK------DERKRKYNVNYTNDV---TSEEMEAYRMKRVHHEDPMRNF 534

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Slu7NP_651659.2 Slu7 160..405 CDD:371683 120/267 (45%)
SMP2NP_568017.1 Slu7 136..405 CDD:403036 120/268 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 214 1.000 Domainoid score I764
eggNOG 1 0.900 - - E1_KOG2560
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4690
Inparanoid 1 1.050 396 1.000 Inparanoid score I480
OMA 1 1.010 - - QHG54674
OrthoDB 1 1.010 - - D816947at2759
OrthoFinder 1 1.000 - - FOG0003809
OrthoInspector 1 1.000 - - otm3345
orthoMCL 1 0.900 - - OOG6_101940
Panther 1 1.100 - - O PTHR12942
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2654
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.840

Return to query results.
Submit another query.